Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ccdc116Q80X53 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ccdc116Q80X53 Scarna2-201ENSMUST00000157560 414 ntBASIC21.53■■□□□ 1.04
Ccdc116Q80X53 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.53■■□□□ 1.04
Ccdc116Q80X53 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ccdc116Q80X53 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Ccdc116Q80X53 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Ccdc116Q80X53 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Ccdc116Q80X53 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Ccdc116Q80X53 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
Ccdc116Q80X53 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ccdc116Q80X53 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ccdc116Q80X53 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ccdc116Q80X53 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Ccdc116Q80X53 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Ccdc116Q80X53 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ccdc116Q80X53 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
Ccdc116Q80X53 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ccdc116Q80X53 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ccdc116Q80X53 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Ccdc116Q80X53 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.49■■□□□ 1.03
Ccdc116Q80X53 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Ccdc116Q80X53 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ccdc116Q80X53 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ccdc116Q80X53 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.49■■□□□ 1.03
Ccdc116Q80X53 Gm16437-201ENSMUST00000025669 507 ntBASIC21.49■■□□□ 1.03
Ccdc116Q80X53 Gm9806-201ENSMUST00000051080 552 ntBASIC21.49■■□□□ 1.03
Ccdc116Q80X53 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ccdc116Q80X53 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Ccdc116Q80X53 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ccdc116Q80X53 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ccdc116Q80X53 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ccdc116Q80X53 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ccdc116Q80X53 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.47■■□□□ 1.03
Ccdc116Q80X53 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Ccdc116Q80X53 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ccdc116Q80X53 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Ccdc116Q80X53 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.46■■□□□ 1.03
Ccdc116Q80X53 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ccdc116Q80X53 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.46■■□□□ 1.03
Ccdc116Q80X53 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Ccdc116Q80X53 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Ccdc116Q80X53 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ccdc116Q80X53 Gm44428-201ENSMUST00000204474 874 ntBASIC21.45■■□□□ 1.02
Ccdc116Q80X53 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ccdc116Q80X53 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ccdc116Q80X53 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Ccdc116Q80X53 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ccdc116Q80X53 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ccdc116Q80X53 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Ccdc116Q80X53 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ccdc116Q80X53 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ccdc116Q80X53 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Ccdc116Q80X53 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ccdc116Q80X53 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ccdc116Q80X53 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ccdc116Q80X53 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ccdc116Q80X53 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ccdc116Q80X53 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ccdc116Q80X53 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.43■■□□□ 1.02
Ccdc116Q80X53 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Ccdc116Q80X53 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
Ccdc116Q80X53 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
Ccdc116Q80X53 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ccdc116Q80X53 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ccdc116Q80X53 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ccdc116Q80X53 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ccdc116Q80X53 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ccdc116Q80X53 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Ccdc116Q80X53 Gm22567-201ENSMUST00000175542 342 ntBASIC21.41■■□□□ 1.02
Ccdc116Q80X53 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Ccdc116Q80X53 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.41■■□□□ 1.02
Ccdc116Q80X53 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ccdc116Q80X53 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ccdc116Q80X53 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.4■■□□□ 1.02
Ccdc116Q80X53 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ccdc116Q80X53 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ccdc116Q80X53 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.4■■□□□ 1.02
Ccdc116Q80X53 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ccdc116Q80X53 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ccdc116Q80X53 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ccdc116Q80X53 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ccdc116Q80X53 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.4■■□□□ 1.02
Ccdc116Q80X53 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.39■■□□□ 1.02
Ccdc116Q80X53 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ccdc116Q80X53 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ccdc116Q80X53 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.39■■□□□ 1.01
Ccdc116Q80X53 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Ccdc116Q80X53 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.39■■□□□ 1.01
Ccdc116Q80X53 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Ccdc116Q80X53 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.39■■□□□ 1.01
Ccdc116Q80X53 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Ccdc116Q80X53 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ccdc116Q80X53 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.38■■□□□ 1.01
Ccdc116Q80X53 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ccdc116Q80X53 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Ccdc116Q80X53 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ccdc116Q80X53 Gm11687-201ENSMUST00000118911 886 ntBASIC21.37■■□□□ 1.01
Ccdc116Q80X53 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.37■■□□□ 1.01
Ccdc116Q80X53 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.37■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms