Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Vrk1Q80X41 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Vrk1Q80X41 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Vrk1Q80X41 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Vrk1Q80X41 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Vrk1Q80X41 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Vrk1Q80X41 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.96■□□□□ 0.95
Vrk1Q80X41 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Vrk1Q80X41 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.96■□□□□ 0.95
Vrk1Q80X41 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Vrk1Q80X41 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Vrk1Q80X41 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Vrk1Q80X41 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.95■□□□□ 0.94
Vrk1Q80X41 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Vrk1Q80X41 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Vrk1Q80X41 Gm10232-201ENSMUST00000089221 720 ntBASIC20.95■□□□□ 0.94
Vrk1Q80X41 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
Vrk1Q80X41 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Vrk1Q80X41 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Vrk1Q80X41 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Vrk1Q80X41 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Vrk1Q80X41 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vrk1Q80X41 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vrk1Q80X41 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vrk1Q80X41 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vrk1Q80X41 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Vrk1Q80X41 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Vrk1Q80X41 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Vrk1Q80X41 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Vrk1Q80X41 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Vrk1Q80X41 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Vrk1Q80X41 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.91■□□□□ 0.94
Vrk1Q80X41 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Vrk1Q80X41 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Vrk1Q80X41 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Vrk1Q80X41 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vrk1Q80X41 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vrk1Q80X41 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.9■□□□□ 0.94
Vrk1Q80X41 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Vrk1Q80X41 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Vrk1Q80X41 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vrk1Q80X41 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Vrk1Q80X41 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Vrk1Q80X41 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Vrk1Q80X41 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Vrk1Q80X41 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Vrk1Q80X41 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Vrk1Q80X41 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Vrk1Q80X41 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Vrk1Q80X41 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Vrk1Q80X41 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Vrk1Q80X41 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Vrk1Q80X41 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Vrk1Q80X41 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Vrk1Q80X41 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Vrk1Q80X41 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Vrk1Q80X41 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vrk1Q80X41 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vrk1Q80X41 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vrk1Q80X41 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vrk1Q80X41 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
Vrk1Q80X41 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.85■□□□□ 0.93
Vrk1Q80X41 Etf1-202ENSMUST00000180351 108 ntBASIC20.85■□□□□ 0.93
Vrk1Q80X41 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vrk1Q80X41 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Vrk1Q80X41 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Vrk1Q80X41 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Vrk1Q80X41 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Vrk1Q80X41 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Vrk1Q80X41 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Vrk1Q80X41 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Vrk1Q80X41 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Vrk1Q80X41 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Vrk1Q80X41 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Vrk1Q80X41 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Vrk1Q80X41 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vrk1Q80X41 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vrk1Q80X41 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Vrk1Q80X41 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vrk1Q80X41 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vrk1Q80X41 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vrk1Q80X41 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.81■□□□□ 0.92
Vrk1Q80X41 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vrk1Q80X41 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vrk1Q80X41 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Vrk1Q80X41 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.8■□□□□ 0.92
Vrk1Q80X41 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.8■□□□□ 0.92
Vrk1Q80X41 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Vrk1Q80X41 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Vrk1Q80X41 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vrk1Q80X41 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Vrk1Q80X41 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vrk1Q80X41 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Vrk1Q80X41 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Vrk1Q80X41 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vrk1Q80X41 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vrk1Q80X41 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vrk1Q80X41 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vrk1Q80X41 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Vrk1Q80X41 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 153 ms