Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
Ddx55Q6ZPL9 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Ddx55Q6ZPL9 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Ddx55Q6ZPL9 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Ddx55Q6ZPL9 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Ddx55Q6ZPL9 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC25.53■■□□□ 1.68
Ddx55Q6ZPL9 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
Ddx55Q6ZPL9 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC25.52■■□□□ 1.68
Ddx55Q6ZPL9 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Ddx55Q6ZPL9 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Ddx55Q6ZPL9 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
Ddx55Q6ZPL9 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Ddx55Q6ZPL9 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Ddx55Q6ZPL9 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
Ddx55Q6ZPL9 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Ddx55Q6ZPL9 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Ddx55Q6ZPL9 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
Ddx55Q6ZPL9 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Ddx55Q6ZPL9 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Ddx55Q6ZPL9 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Ddx55Q6ZPL9 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
Ddx55Q6ZPL9 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Ddx55Q6ZPL9 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC25.49■■□□□ 1.67
Ddx55Q6ZPL9 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Ddx55Q6ZPL9 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC25.49■■□□□ 1.67
Ddx55Q6ZPL9 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Ddx55Q6ZPL9 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
Ddx55Q6ZPL9 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
Ddx55Q6ZPL9 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Ddx55Q6ZPL9 Gm13241-201ENSMUST00000094493 780 ntBASIC25.48■■□□□ 1.67
Ddx55Q6ZPL9 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Ddx55Q6ZPL9 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC25.47■■□□□ 1.67
Ddx55Q6ZPL9 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
Ddx55Q6ZPL9 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Ddx55Q6ZPL9 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Ddx55Q6ZPL9 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Ddx55Q6ZPL9 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
Ddx55Q6ZPL9 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Ddx55Q6ZPL9 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Ddx55Q6ZPL9 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Ddx55Q6ZPL9 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Ddx55Q6ZPL9 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Ddx55Q6ZPL9 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Ddx55Q6ZPL9 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Ddx55Q6ZPL9 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Ddx55Q6ZPL9 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC25.44■■□□□ 1.66
Ddx55Q6ZPL9 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
Ddx55Q6ZPL9 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Ddx55Q6ZPL9 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC25.43■■□□□ 1.66
Ddx55Q6ZPL9 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC25.43■■□□□ 1.66
Ddx55Q6ZPL9 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
Ddx55Q6ZPL9 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Ddx55Q6ZPL9 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Ddx55Q6ZPL9 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Ddx55Q6ZPL9 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC25.42■■□□□ 1.66
Ddx55Q6ZPL9 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC25.42■■□□□ 1.66
Ddx55Q6ZPL9 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Ddx55Q6ZPL9 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Ddx55Q6ZPL9 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Ddx55Q6ZPL9 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
Ddx55Q6ZPL9 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC25.4■■□□□ 1.66
Ddx55Q6ZPL9 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
Ddx55Q6ZPL9 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
Ddx55Q6ZPL9 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC25.4■■□□□ 1.66
Ddx55Q6ZPL9 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC25.4■■□□□ 1.66
Ddx55Q6ZPL9 Gm43034-201ENSMUST00000198678 1364 ntBASIC25.4■■□□□ 1.66
Ddx55Q6ZPL9 Gm28536-201ENSMUST00000190971 1317 ntBASIC25.39■■□□□ 1.66
Ddx55Q6ZPL9 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Ddx55Q6ZPL9 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Ddx55Q6ZPL9 Gm22238-201ENSMUST00000175222 88 ntBASIC25.39■■□□□ 1.66
Ddx55Q6ZPL9 Gm21956-201ENSMUST00000179946 522 ntBASIC25.39■■□□□ 1.66
Ddx55Q6ZPL9 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Ddx55Q6ZPL9 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
Ddx55Q6ZPL9 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Ddx55Q6ZPL9 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC25.38■■□□□ 1.65
Ddx55Q6ZPL9 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Ddx55Q6ZPL9 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
Ddx55Q6ZPL9 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC25.37■■□□□ 1.65
Ddx55Q6ZPL9 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
Ddx55Q6ZPL9 Gm9847-201ENSMUST00000052528 599 ntBASIC25.37■■□□□ 1.65
Ddx55Q6ZPL9 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Ddx55Q6ZPL9 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
Ddx55Q6ZPL9 Gm40881-201ENSMUST00000223397 166 ntBASIC25.36■■□□□ 1.65
Ddx55Q6ZPL9 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
Ddx55Q6ZPL9 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC25.35■■□□□ 1.65
Ddx55Q6ZPL9 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Ddx55Q6ZPL9 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Ddx55Q6ZPL9 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC25.34■■□□□ 1.65
Ddx55Q6ZPL9 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC25.34■■□□□ 1.65
Ddx55Q6ZPL9 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
Ddx55Q6ZPL9 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Ddx55Q6ZPL9 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Ddx55Q6ZPL9 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC25.33■■□□□ 1.65
Ddx55Q6ZPL9 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC25.33■■□□□ 1.65
Ddx55Q6ZPL9 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Ddx55Q6ZPL9 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
Ddx55Q6ZPL9 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Ddx55Q6ZPL9 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC25.32■■□□□ 1.64
Ddx55Q6ZPL9 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
Ddx55Q6ZPL9 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms