Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Scn10aQ6QIY3 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
Scn10aQ6QIY3 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.72
Scn10aQ6QIY3 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Scn10aQ6QIY3 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Scn10aQ6QIY3 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Scn10aQ6QIY3 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Scn10aQ6QIY3 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
Scn10aQ6QIY3 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC25.75■■□□□ 1.71
Scn10aQ6QIY3 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Scn10aQ6QIY3 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC25.75■■□□□ 1.71
Scn10aQ6QIY3 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
Scn10aQ6QIY3 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Scn10aQ6QIY3 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Scn10aQ6QIY3 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC25.74■■□□□ 1.71
Scn10aQ6QIY3 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Scn10aQ6QIY3 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Scn10aQ6QIY3 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Scn10aQ6QIY3 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Scn10aQ6QIY3 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Scn10aQ6QIY3 Gm22238-201ENSMUST00000175222 88 ntBASIC25.73■■□□□ 1.71
Scn10aQ6QIY3 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC25.73■■□□□ 1.71
Scn10aQ6QIY3 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Scn10aQ6QIY3 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Scn10aQ6QIY3 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Scn10aQ6QIY3 Gm7417-201ENSMUST00000192950 473 ntBASIC25.71■■□□□ 1.71
Scn10aQ6QIY3 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC25.71■■□□□ 1.71
Scn10aQ6QIY3 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Scn10aQ6QIY3 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
Scn10aQ6QIY3 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Scn10aQ6QIY3 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC25.7■■□□□ 1.7
Scn10aQ6QIY3 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Scn10aQ6QIY3 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Scn10aQ6QIY3 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Scn10aQ6QIY3 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Scn10aQ6QIY3 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
Scn10aQ6QIY3 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC25.69■■□□□ 1.7
Scn10aQ6QIY3 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC25.69■■□□□ 1.7
Scn10aQ6QIY3 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Scn10aQ6QIY3 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC25.69■■□□□ 1.7
Scn10aQ6QIY3 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Scn10aQ6QIY3 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
Scn10aQ6QIY3 Nsd1-206ENSMUST00000224918 1001 ntBASIC25.69■■□□□ 1.7
Scn10aQ6QIY3 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Scn10aQ6QIY3 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
Scn10aQ6QIY3 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
Scn10aQ6QIY3 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Scn10aQ6QIY3 Fezf2-202ENSMUST00000224023 1917 ntBASIC25.68■■□□□ 1.7
Scn10aQ6QIY3 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Scn10aQ6QIY3 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Scn10aQ6QIY3 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Scn10aQ6QIY3 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC25.67■■□□□ 1.7
Scn10aQ6QIY3 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Scn10aQ6QIY3 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC25.67■■□□□ 1.7
Scn10aQ6QIY3 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC25.67■■□□□ 1.7
Scn10aQ6QIY3 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Scn10aQ6QIY3 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
Scn10aQ6QIY3 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
Scn10aQ6QIY3 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC25.66■■□□□ 1.7
Scn10aQ6QIY3 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Scn10aQ6QIY3 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Scn10aQ6QIY3 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Scn10aQ6QIY3 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Scn10aQ6QIY3 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
Scn10aQ6QIY3 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Scn10aQ6QIY3 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
Scn10aQ6QIY3 Gm28536-201ENSMUST00000190971 1317 ntBASIC25.64■■□□□ 1.69
Scn10aQ6QIY3 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.69
Scn10aQ6QIY3 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC25.64■■□□□ 1.69
Scn10aQ6QIY3 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Scn10aQ6QIY3 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC25.63■■□□□ 1.69
Scn10aQ6QIY3 Gm43034-201ENSMUST00000198678 1364 ntBASIC25.63■■□□□ 1.69
Scn10aQ6QIY3 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Scn10aQ6QIY3 AC122428.3-201ENSMUST00000215551 2290 ntBASIC25.62■■□□□ 1.69
Scn10aQ6QIY3 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Scn10aQ6QIY3 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Scn10aQ6QIY3 Gm40881-201ENSMUST00000223397 166 ntBASIC25.62■■□□□ 1.69
Scn10aQ6QIY3 Gm9847-201ENSMUST00000052528 599 ntBASIC25.62■■□□□ 1.69
Scn10aQ6QIY3 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC25.62■■□□□ 1.69
Scn10aQ6QIY3 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
Scn10aQ6QIY3 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Scn10aQ6QIY3 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC25.61■■□□□ 1.69
Scn10aQ6QIY3 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Scn10aQ6QIY3 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Scn10aQ6QIY3 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC25.6■■□□□ 1.69
Scn10aQ6QIY3 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
Scn10aQ6QIY3 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Scn10aQ6QIY3 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Scn10aQ6QIY3 Gm12922-201ENSMUST00000120626 809 ntBASIC25.6■■□□□ 1.69
Scn10aQ6QIY3 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
Scn10aQ6QIY3 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC25.6■■□□□ 1.69
Scn10aQ6QIY3 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Scn10aQ6QIY3 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Scn10aQ6QIY3 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Scn10aQ6QIY3 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Scn10aQ6QIY3 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Scn10aQ6QIY3 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Scn10aQ6QIY3 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Scn10aQ6QIY3 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Scn10aQ6QIY3 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms