Protein–RNA interactions for Protein: Q6PE54

Dhx40, Probable ATP-dependent RNA helicase DHX40, mousemouse

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx40Q6PE54 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Dhx40Q6PE54 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Dhx40Q6PE54 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Dhx40Q6PE54 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC24.44■■□□□ 1.5
Dhx40Q6PE54 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Dhx40Q6PE54 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Dhx40Q6PE54 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC24.43■■□□□ 1.5
Dhx40Q6PE54 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Dhx40Q6PE54 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
Dhx40Q6PE54 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Dhx40Q6PE54 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Dhx40Q6PE54 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
Dhx40Q6PE54 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Dhx40Q6PE54 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC24.43■■□□□ 1.5
Dhx40Q6PE54 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Dhx40Q6PE54 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Dhx40Q6PE54 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Dhx40Q6PE54 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC24.42■■□□□ 1.5
Dhx40Q6PE54 Gm9812-201ENSMUST00000061934 968 ntBASIC24.42■■□□□ 1.5
Dhx40Q6PE54 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC24.41■■□□□ 1.5
Dhx40Q6PE54 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Dhx40Q6PE54 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Dhx40Q6PE54 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Dhx40Q6PE54 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
Dhx40Q6PE54 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC24.4■■□□□ 1.5
Dhx40Q6PE54 Gm4799-201ENSMUST00000095396 657 ntBASIC24.4■■□□□ 1.5
Dhx40Q6PE54 Gm9910-201ENSMUST00000195385 1550 ntBASIC24.4■■□□□ 1.5
Dhx40Q6PE54 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Dhx40Q6PE54 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Dhx40Q6PE54 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Dhx40Q6PE54 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC24.39■■□□□ 1.49
Dhx40Q6PE54 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Dhx40Q6PE54 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Dhx40Q6PE54 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC24.38■■□□□ 1.49
Dhx40Q6PE54 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Dhx40Q6PE54 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Dhx40Q6PE54 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Dhx40Q6PE54 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
Dhx40Q6PE54 Gm7199-201ENSMUST00000118327 1485 ntBASIC24.38■■□□□ 1.49
Dhx40Q6PE54 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Dhx40Q6PE54 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Dhx40Q6PE54 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Dhx40Q6PE54 Gm22567-201ENSMUST00000175542 342 ntBASIC24.37■■□□□ 1.49
Dhx40Q6PE54 AC122317.2-201ENSMUST00000218708 1248 ntBASIC24.37■■□□□ 1.49
Dhx40Q6PE54 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Dhx40Q6PE54 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC24.36■■□□□ 1.49
Dhx40Q6PE54 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Dhx40Q6PE54 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Dhx40Q6PE54 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC24.36■■□□□ 1.49
Dhx40Q6PE54 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Dhx40Q6PE54 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Dhx40Q6PE54 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Dhx40Q6PE54 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC24.35■■□□□ 1.49
Dhx40Q6PE54 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Dhx40Q6PE54 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
Dhx40Q6PE54 AC153911.1-201ENSMUST00000220378 758 ntBASIC24.34■■□□□ 1.49
Dhx40Q6PE54 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Dhx40Q6PE54 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Dhx40Q6PE54 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC24.33■■□□□ 1.49
Dhx40Q6PE54 Gm20634-201ENSMUST00000090779 2956 ntBASIC24.33■■□□□ 1.49
Dhx40Q6PE54 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Dhx40Q6PE54 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Dhx40Q6PE54 AC153524.1-201ENSMUST00000220436 1935 ntBASIC24.32■■□□□ 1.48
Dhx40Q6PE54 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
Dhx40Q6PE54 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Dhx40Q6PE54 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC24.32■■□□□ 1.48
Dhx40Q6PE54 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC24.32■■□□□ 1.48
Dhx40Q6PE54 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
Dhx40Q6PE54 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC24.31■■□□□ 1.48
Dhx40Q6PE54 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Dhx40Q6PE54 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC24.31■■□□□ 1.48
Dhx40Q6PE54 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC24.31■■□□□ 1.48
Dhx40Q6PE54 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC24.31■■□□□ 1.48
Dhx40Q6PE54 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Dhx40Q6PE54 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Dhx40Q6PE54 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Dhx40Q6PE54 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Dhx40Q6PE54 Gm7432-201ENSMUST00000210343 879 ntBASIC24.3■■□□□ 1.48
Dhx40Q6PE54 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
Dhx40Q6PE54 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Dhx40Q6PE54 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC24.29■■□□□ 1.48
Dhx40Q6PE54 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Dhx40Q6PE54 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Dhx40Q6PE54 Gm12818-201ENSMUST00000117562 1349 ntBASIC24.29■■□□□ 1.48
Dhx40Q6PE54 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Dhx40Q6PE54 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
Dhx40Q6PE54 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Dhx40Q6PE54 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
Dhx40Q6PE54 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Dhx40Q6PE54 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Dhx40Q6PE54 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Dhx40Q6PE54 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
Dhx40Q6PE54 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Dhx40Q6PE54 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC24.27■■□□□ 1.48
Dhx40Q6PE54 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
Dhx40Q6PE54 Mir3960-201ENSMUST00000198213 73 ntBASIC24.26■■□□□ 1.47
Dhx40Q6PE54 Gm45364-201ENSMUST00000210883 159 ntBASIC24.26■■□□□ 1.47
Dhx40Q6PE54 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Dhx40Q6PE54 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Dhx40Q6PE54 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms