Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf220Q6PDX6 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf220Q6PDX6 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf220Q6PDX6 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf220Q6PDX6 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.65■□□□□ 0.9
Rnf220Q6PDX6 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf220Q6PDX6 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf220Q6PDX6 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf220Q6PDX6 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf220Q6PDX6 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rnf220Q6PDX6 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rnf220Q6PDX6 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Rnf220Q6PDX6 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rnf220Q6PDX6 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rnf220Q6PDX6 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rnf220Q6PDX6 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Rnf220Q6PDX6 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf220Q6PDX6 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf220Q6PDX6 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.63■□□□□ 0.89
Rnf220Q6PDX6 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.63■□□□□ 0.89
Rnf220Q6PDX6 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf220Q6PDX6 Particl-201ENSMUST00000205370 1560 ntBASIC20.63■□□□□ 0.89
Rnf220Q6PDX6 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf220Q6PDX6 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rnf220Q6PDX6 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rnf220Q6PDX6 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rnf220Q6PDX6 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.61■□□□□ 0.89
Rnf220Q6PDX6 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf220Q6PDX6 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf220Q6PDX6 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf220Q6PDX6 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf220Q6PDX6 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf220Q6PDX6 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.6■□□□□ 0.89
Rnf220Q6PDX6 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.6■□□□□ 0.89
Rnf220Q6PDX6 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rnf220Q6PDX6 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rnf220Q6PDX6 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rnf220Q6PDX6 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.6■□□□□ 0.89
Rnf220Q6PDX6 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.59■□□□□ 0.89
Rnf220Q6PDX6 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rnf220Q6PDX6 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rnf220Q6PDX6 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rnf220Q6PDX6 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rnf220Q6PDX6 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Rnf220Q6PDX6 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.59■□□□□ 0.89
Rnf220Q6PDX6 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.59■□□□□ 0.89
Rnf220Q6PDX6 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rnf220Q6PDX6 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rnf220Q6PDX6 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rnf220Q6PDX6 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
Rnf220Q6PDX6 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Rnf220Q6PDX6 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Rnf220Q6PDX6 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.58■□□□□ 0.88
Rnf220Q6PDX6 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rnf220Q6PDX6 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Rnf220Q6PDX6 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rnf220Q6PDX6 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rnf220Q6PDX6 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rnf220Q6PDX6 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rnf220Q6PDX6 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
Rnf220Q6PDX6 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rnf220Q6PDX6 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rnf220Q6PDX6 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf220Q6PDX6 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf220Q6PDX6 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf220Q6PDX6 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Rnf220Q6PDX6 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf220Q6PDX6 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf220Q6PDX6 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf220Q6PDX6 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf220Q6PDX6 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Rnf220Q6PDX6 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Rnf220Q6PDX6 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rnf220Q6PDX6 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rnf220Q6PDX6 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rnf220Q6PDX6 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rnf220Q6PDX6 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rnf220Q6PDX6 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Rnf220Q6PDX6 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rnf220Q6PDX6 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Rnf220Q6PDX6 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rnf220Q6PDX6 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rnf220Q6PDX6 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf220Q6PDX6 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf220Q6PDX6 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf220Q6PDX6 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf220Q6PDX6 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf220Q6PDX6 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rnf220Q6PDX6 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rnf220Q6PDX6 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rnf220Q6PDX6 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rnf220Q6PDX6 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
Rnf220Q6PDX6 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.51■□□□□ 0.87
Rnf220Q6PDX6 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf220Q6PDX6 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf220Q6PDX6 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Rnf220Q6PDX6 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf220Q6PDX6 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf220Q6PDX6 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf220Q6PDX6 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 154.7 ms