Protein–RNA interactions for Protein: Q6PDC0

Rundc3b, RUN domain-containing protein 3B, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rundc3bQ6PDC0 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rundc3bQ6PDC0 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.66■□□□□ 0.9
Rundc3bQ6PDC0 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rundc3bQ6PDC0 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rundc3bQ6PDC0 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rundc3bQ6PDC0 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rundc3bQ6PDC0 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC20.65■□□□□ 0.9
Rundc3bQ6PDC0 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.65■□□□□ 0.9
Rundc3bQ6PDC0 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Rundc3bQ6PDC0 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rundc3bQ6PDC0 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.64■□□□□ 0.9
Rundc3bQ6PDC0 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Rundc3bQ6PDC0 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rundc3bQ6PDC0 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rundc3bQ6PDC0 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Rundc3bQ6PDC0 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rundc3bQ6PDC0 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rundc3bQ6PDC0 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rundc3bQ6PDC0 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Rundc3bQ6PDC0 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20.62■□□□□ 0.89
Rundc3bQ6PDC0 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rundc3bQ6PDC0 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rundc3bQ6PDC0 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rundc3bQ6PDC0 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Rundc3bQ6PDC0 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.61■□□□□ 0.89
Rundc3bQ6PDC0 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rundc3bQ6PDC0 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Rundc3bQ6PDC0 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rundc3bQ6PDC0 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Rundc3bQ6PDC0 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Rundc3bQ6PDC0 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.59■□□□□ 0.89
Rundc3bQ6PDC0 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rundc3bQ6PDC0 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Rundc3bQ6PDC0 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rundc3bQ6PDC0 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.58■□□□□ 0.89
Rundc3bQ6PDC0 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Rundc3bQ6PDC0 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Rundc3bQ6PDC0 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rundc3bQ6PDC0 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.57■□□□□ 0.88
Rundc3bQ6PDC0 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rundc3bQ6PDC0 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.57■□□□□ 0.88
Rundc3bQ6PDC0 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rundc3bQ6PDC0 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rundc3bQ6PDC0 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rundc3bQ6PDC0 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Rundc3bQ6PDC0 Notumos-201ENSMUST00000151998 2659 ntBASIC20.57■□□□□ 0.88
Rundc3bQ6PDC0 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rundc3bQ6PDC0 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rundc3bQ6PDC0 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rundc3bQ6PDC0 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.56■□□□□ 0.88
Rundc3bQ6PDC0 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
Rundc3bQ6PDC0 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rundc3bQ6PDC0 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rundc3bQ6PDC0 Gm24970-201ENSMUST00000175582 82 ntBASIC20.55■□□□□ 0.88
Rundc3bQ6PDC0 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rundc3bQ6PDC0 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rundc3bQ6PDC0 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rundc3bQ6PDC0 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rundc3bQ6PDC0 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.54■□□□□ 0.88
Rundc3bQ6PDC0 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Rundc3bQ6PDC0 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rundc3bQ6PDC0 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rundc3bQ6PDC0 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rundc3bQ6PDC0 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rundc3bQ6PDC0 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.53■□□□□ 0.88
Rundc3bQ6PDC0 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rundc3bQ6PDC0 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rundc3bQ6PDC0 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rundc3bQ6PDC0 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rundc3bQ6PDC0 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rundc3bQ6PDC0 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Rundc3bQ6PDC0 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rundc3bQ6PDC0 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rundc3bQ6PDC0 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.52■□□□□ 0.88
Rundc3bQ6PDC0 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rundc3bQ6PDC0 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rundc3bQ6PDC0 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.51■□□□□ 0.87
Rundc3bQ6PDC0 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rundc3bQ6PDC0 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.51■□□□□ 0.87
Rundc3bQ6PDC0 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rundc3bQ6PDC0 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rundc3bQ6PDC0 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rundc3bQ6PDC0 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rundc3bQ6PDC0 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rundc3bQ6PDC0 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.5■□□□□ 0.87
Rundc3bQ6PDC0 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.5■□□□□ 0.87
Rundc3bQ6PDC0 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rundc3bQ6PDC0 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rundc3bQ6PDC0 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rundc3bQ6PDC0 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rundc3bQ6PDC0 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Rundc3bQ6PDC0 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Rundc3bQ6PDC0 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rundc3bQ6PDC0 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rundc3bQ6PDC0 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.5■□□□□ 0.87
Rundc3bQ6PDC0 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.5■□□□□ 0.87
Rundc3bQ6PDC0 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rundc3bQ6PDC0 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.49■□□□□ 0.87
Rundc3bQ6PDC0 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rundc3bQ6PDC0 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 136.7 ms