Protein–RNA interactions for Protein: Q6P8X1

Snx6, Sorting nexin-6, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx6Q6P8X1 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Snx6Q6P8X1 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Snx6Q6P8X1 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Snx6Q6P8X1 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Snx6Q6P8X1 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.87■□□□□ 0.93
Snx6Q6P8X1 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Snx6Q6P8X1 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Snx6Q6P8X1 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Snx6Q6P8X1 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Snx6Q6P8X1 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Snx6Q6P8X1 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Snx6Q6P8X1 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Snx6Q6P8X1 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Snx6Q6P8X1 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Snx6Q6P8X1 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Snx6Q6P8X1 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Snx6Q6P8X1 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Snx6Q6P8X1 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Snx6Q6P8X1 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
Snx6Q6P8X1 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Snx6Q6P8X1 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Snx6Q6P8X1 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Snx6Q6P8X1 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Snx6Q6P8X1 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Snx6Q6P8X1 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Snx6Q6P8X1 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Snx6Q6P8X1 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Snx6Q6P8X1 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Snx6Q6P8X1 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Snx6Q6P8X1 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.84■□□□□ 0.93
Snx6Q6P8X1 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.84■□□□□ 0.93
Snx6Q6P8X1 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Snx6Q6P8X1 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Snx6Q6P8X1 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Snx6Q6P8X1 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Snx6Q6P8X1 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.83■□□□□ 0.93
Snx6Q6P8X1 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Snx6Q6P8X1 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.83■□□□□ 0.93
Snx6Q6P8X1 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Snx6Q6P8X1 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Snx6Q6P8X1 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Snx6Q6P8X1 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Snx6Q6P8X1 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
Snx6Q6P8X1 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Snx6Q6P8X1 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Snx6Q6P8X1 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Snx6Q6P8X1 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Snx6Q6P8X1 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.81■□□□□ 0.92
Snx6Q6P8X1 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Snx6Q6P8X1 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Snx6Q6P8X1 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.81■□□□□ 0.92
Snx6Q6P8X1 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.8■□□□□ 0.92
Snx6Q6P8X1 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Snx6Q6P8X1 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.8■□□□□ 0.92
Snx6Q6P8X1 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Snx6Q6P8X1 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Snx6Q6P8X1 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Snx6Q6P8X1 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Snx6Q6P8X1 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Snx6Q6P8X1 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Snx6Q6P8X1 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Snx6Q6P8X1 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.78■□□□□ 0.92
Snx6Q6P8X1 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Snx6Q6P8X1 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Snx6Q6P8X1 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.78■□□□□ 0.92
Snx6Q6P8X1 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Snx6Q6P8X1 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Snx6Q6P8X1 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Snx6Q6P8X1 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Snx6Q6P8X1 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.77■□□□□ 0.92
Snx6Q6P8X1 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Snx6Q6P8X1 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Snx6Q6P8X1 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Snx6Q6P8X1 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.76■□□□□ 0.91
Snx6Q6P8X1 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Snx6Q6P8X1 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.76■□□□□ 0.91
Snx6Q6P8X1 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Snx6Q6P8X1 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.75■□□□□ 0.91
Snx6Q6P8X1 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Snx6Q6P8X1 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Snx6Q6P8X1 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Snx6Q6P8X1 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Snx6Q6P8X1 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Snx6Q6P8X1 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Snx6Q6P8X1 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Snx6Q6P8X1 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Snx6Q6P8X1 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Snx6Q6P8X1 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Snx6Q6P8X1 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Snx6Q6P8X1 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Snx6Q6P8X1 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Snx6Q6P8X1 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Snx6Q6P8X1 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Snx6Q6P8X1 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Snx6Q6P8X1 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Snx6Q6P8X1 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Snx6Q6P8X1 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.72■□□□□ 0.91
Snx6Q6P8X1 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Snx6Q6P8X1 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Snx6Q6P8X1 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 168.4 ms