Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VcanQ62059 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.2■□□□□ 0.99
VcanQ62059 Gm2011-201ENSMUST00000203124 1263 ntBASIC21.2■□□□□ 0.98
VcanQ62059 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
VcanQ62059 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.2■□□□□ 0.98
VcanQ62059 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.2■□□□□ 0.98
VcanQ62059 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
VcanQ62059 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
VcanQ62059 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
VcanQ62059 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
VcanQ62059 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
VcanQ62059 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC21.18■□□□□ 0.98
VcanQ62059 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
VcanQ62059 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC21.17■□□□□ 0.98
VcanQ62059 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.17■□□□□ 0.98
VcanQ62059 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.17■□□□□ 0.98
VcanQ62059 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VcanQ62059 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
VcanQ62059 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
VcanQ62059 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VcanQ62059 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
VcanQ62059 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC21.16■□□□□ 0.98
VcanQ62059 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
VcanQ62059 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
VcanQ62059 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.15■□□□□ 0.98
VcanQ62059 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
VcanQ62059 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
VcanQ62059 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
VcanQ62059 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
VcanQ62059 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
VcanQ62059 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
VcanQ62059 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
VcanQ62059 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
VcanQ62059 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.13■□□□□ 0.97
VcanQ62059 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.13■□□□□ 0.97
VcanQ62059 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
VcanQ62059 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VcanQ62059 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VcanQ62059 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VcanQ62059 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
VcanQ62059 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
VcanQ62059 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
VcanQ62059 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
VcanQ62059 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
VcanQ62059 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
VcanQ62059 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
VcanQ62059 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.11■□□□□ 0.97
VcanQ62059 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
VcanQ62059 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
VcanQ62059 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
VcanQ62059 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
VcanQ62059 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
VcanQ62059 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
VcanQ62059 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC21.09■□□□□ 0.97
VcanQ62059 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
VcanQ62059 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VcanQ62059 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.09■□□□□ 0.97
VcanQ62059 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
VcanQ62059 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.08■□□□□ 0.97
VcanQ62059 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC21.08■□□□□ 0.97
VcanQ62059 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
VcanQ62059 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
VcanQ62059 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
VcanQ62059 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
VcanQ62059 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
VcanQ62059 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
VcanQ62059 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
VcanQ62059 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
VcanQ62059 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.06■□□□□ 0.96
VcanQ62059 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
VcanQ62059 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VcanQ62059 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
VcanQ62059 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
VcanQ62059 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VcanQ62059 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
VcanQ62059 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
VcanQ62059 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VcanQ62059 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VcanQ62059 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
VcanQ62059 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VcanQ62059 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VcanQ62059 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
VcanQ62059 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC21.05■□□□□ 0.96
VcanQ62059 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
VcanQ62059 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VcanQ62059 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC21.04■□□□□ 0.96
VcanQ62059 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
VcanQ62059 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VcanQ62059 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
VcanQ62059 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
VcanQ62059 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.03■□□□□ 0.96
VcanQ62059 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VcanQ62059 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
VcanQ62059 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
VcanQ62059 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC21.03■□□□□ 0.96
VcanQ62059 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
VcanQ62059 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.96
VcanQ62059 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VcanQ62059 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VcanQ62059 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms