Protein–RNA interactions for Protein: Q61191

Hcfc1, Host cell factor 1, mousemouse

Known RBP Predictions only

Length 2,045 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1Q61191 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hcfc1Q61191 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hcfc1Q61191 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.91■□□□□ 0.62
Hcfc1Q61191 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.91■□□□□ 0.62
Hcfc1Q61191 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.91■□□□□ 0.62
Hcfc1Q61191 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hcfc1Q61191 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.91■□□□□ 0.62
Hcfc1Q61191 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Hcfc1Q61191 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hcfc1Q61191 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Hcfc1Q61191 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Hcfc1Q61191 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hcfc1Q61191 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hcfc1Q61191 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Hcfc1Q61191 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.9■□□□□ 0.62
Hcfc1Q61191 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hcfc1Q61191 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hcfc1Q61191 Gm21956-201ENSMUST00000179946 522 ntBASIC18.9■□□□□ 0.62
Hcfc1Q61191 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.9■□□□□ 0.62
Hcfc1Q61191 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.9■□□□□ 0.62
Hcfc1Q61191 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.62
Hcfc1Q61191 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Hcfc1Q61191 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.88■□□□□ 0.61
Hcfc1Q61191 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Hcfc1Q61191 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Hcfc1Q61191 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.88■□□□□ 0.61
Hcfc1Q61191 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hcfc1Q61191 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hcfc1Q61191 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hcfc1Q61191 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Hcfc1Q61191 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hcfc1Q61191 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hcfc1Q61191 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.87■□□□□ 0.61
Hcfc1Q61191 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Hcfc1Q61191 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hcfc1Q61191 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hcfc1Q61191 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.86■□□□□ 0.61
Hcfc1Q61191 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.86■□□□□ 0.61
Hcfc1Q61191 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC18.86■□□□□ 0.61
Hcfc1Q61191 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hcfc1Q61191 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hcfc1Q61191 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.86■□□□□ 0.61
Hcfc1Q61191 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hcfc1Q61191 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Hcfc1Q61191 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Hcfc1Q61191 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Hcfc1Q61191 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
Hcfc1Q61191 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hcfc1Q61191 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hcfc1Q61191 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Hcfc1Q61191 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Hcfc1Q61191 Gm7417-201ENSMUST00000192950 473 ntBASIC18.84■□□□□ 0.61
Hcfc1Q61191 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.84■□□□□ 0.61
Hcfc1Q61191 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hcfc1Q61191 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hcfc1Q61191 Gm13241-201ENSMUST00000094493 780 ntBASIC18.84■□□□□ 0.61
Hcfc1Q61191 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hcfc1Q61191 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hcfc1Q61191 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Hcfc1Q61191 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Hcfc1Q61191 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.83■□□□□ 0.6
Hcfc1Q61191 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.83■□□□□ 0.6
Hcfc1Q61191 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18.83■□□□□ 0.6
Hcfc1Q61191 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hcfc1Q61191 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hcfc1Q61191 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Hcfc1Q61191 Gm22238-201ENSMUST00000175222 88 ntBASIC18.81■□□□□ 0.6
Hcfc1Q61191 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hcfc1Q61191 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hcfc1Q61191 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Hcfc1Q61191 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Hcfc1Q61191 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hcfc1Q61191 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hcfc1Q61191 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Hcfc1Q61191 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.8■□□□□ 0.6
Hcfc1Q61191 Gm9847-201ENSMUST00000052528 599 ntBASIC18.8■□□□□ 0.6
Hcfc1Q61191 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Hcfc1Q61191 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Hcfc1Q61191 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.79■□□□□ 0.6
Hcfc1Q61191 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hcfc1Q61191 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Hcfc1Q61191 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hcfc1Q61191 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hcfc1Q61191 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.79■□□□□ 0.6
Hcfc1Q61191 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hcfc1Q61191 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.78■□□□□ 0.6
Hcfc1Q61191 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.78■□□□□ 0.6
Hcfc1Q61191 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hcfc1Q61191 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Hcfc1Q61191 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hcfc1Q61191 Gm12922-201ENSMUST00000120626 809 ntBASIC18.78■□□□□ 0.6
Hcfc1Q61191 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Hcfc1Q61191 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Hcfc1Q61191 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hcfc1Q61191 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
Hcfc1Q61191 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hcfc1Q61191 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.77■□□□□ 0.6
Hcfc1Q61191 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hcfc1Q61191 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Hcfc1Q61191 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.77■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms