Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.7■□□□□ 0.58
Clns1aQ61189 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clns1aQ61189 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clns1aQ61189 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.7■□□□□ 0.58
Clns1aQ61189 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clns1aQ61189 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clns1aQ61189 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Clns1aQ61189 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Clns1aQ61189 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clns1aQ61189 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC18.68■□□□□ 0.58
Clns1aQ61189 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.68■□□□□ 0.58
Clns1aQ61189 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clns1aQ61189 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clns1aQ61189 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.68■□□□□ 0.58
Clns1aQ61189 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Clns1aQ61189 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Clns1aQ61189 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
Clns1aQ61189 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.67■□□□□ 0.58
Clns1aQ61189 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clns1aQ61189 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clns1aQ61189 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clns1aQ61189 Tdp2-203ENSMUST00000223804 1136 ntBASIC18.66■□□□□ 0.58
Clns1aQ61189 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clns1aQ61189 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clns1aQ61189 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
Clns1aQ61189 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clns1aQ61189 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Clns1aQ61189 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Clns1aQ61189 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clns1aQ61189 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clns1aQ61189 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clns1aQ61189 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clns1aQ61189 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Clns1aQ61189 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clns1aQ61189 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
Clns1aQ61189 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.63■□□□□ 0.57
Clns1aQ61189 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clns1aQ61189 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.62■□□□□ 0.57
Clns1aQ61189 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clns1aQ61189 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
Clns1aQ61189 Gm37136-201ENSMUST00000194368 194 ntBASIC18.62■□□□□ 0.57
Clns1aQ61189 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Clns1aQ61189 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Clns1aQ61189 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clns1aQ61189 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clns1aQ61189 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clns1aQ61189 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clns1aQ61189 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clns1aQ61189 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC18.61■□□□□ 0.57
Clns1aQ61189 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clns1aQ61189 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clns1aQ61189 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Clns1aQ61189 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Clns1aQ61189 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clns1aQ61189 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clns1aQ61189 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Clns1aQ61189 Gm45855-201ENSMUST00000212546 880 ntBASIC18.6■□□□□ 0.57
Clns1aQ61189 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clns1aQ61189 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clns1aQ61189 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Clns1aQ61189 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Clns1aQ61189 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clns1aQ61189 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC18.58■□□□□ 0.57
Clns1aQ61189 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Clns1aQ61189 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Clns1aQ61189 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Clns1aQ61189 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Clns1aQ61189 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clns1aQ61189 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clns1aQ61189 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Clns1aQ61189 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clns1aQ61189 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Clns1aQ61189 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clns1aQ61189 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clns1aQ61189 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Clns1aQ61189 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
Clns1aQ61189 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clns1aQ61189 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Clns1aQ61189 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clns1aQ61189 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clns1aQ61189 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Clns1aQ61189 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clns1aQ61189 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clns1aQ61189 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.55■□□□□ 0.56
Clns1aQ61189 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clns1aQ61189 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Clns1aQ61189 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clns1aQ61189 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clns1aQ61189 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clns1aQ61189 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clns1aQ61189 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clns1aQ61189 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Clns1aQ61189 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
Clns1aQ61189 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clns1aQ61189 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clns1aQ61189 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC18.54■□□□□ 0.56
Clns1aQ61189 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clns1aQ61189 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clns1aQ61189 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clns1aQ61189 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms