Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Trav3-1Q5R1I8 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav3-1Q5R1I8 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav3-1Q5R1I8 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav3-1Q5R1I8 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav3-1Q5R1I8 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav3-1Q5R1I8 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav3-1Q5R1I8 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav3-1Q5R1I8 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav3-1Q5R1I8 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav3-1Q5R1I8 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav3-1Q5R1I8 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav3-1Q5R1I8 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav3-1Q5R1I8 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trav3-1Q5R1I8 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav3-1Q5R1I8 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trav3-1Q5R1I8 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav3-1Q5R1I8 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav3-1Q5R1I8 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav3-1Q5R1I8 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav3-1Q5R1I8 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav3-1Q5R1I8 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Trav3-1Q5R1I8 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav3-1Q5R1I8 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Trav3-1Q5R1I8 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC14.96□□□□□ -0.01
Trav3-1Q5R1I8 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav3-1Q5R1I8 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
Trav3-1Q5R1I8 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav3-1Q5R1I8 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav3-1Q5R1I8 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC14.96□□□□□ -0.02
Trav3-1Q5R1I8 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav3-1Q5R1I8 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav3-1Q5R1I8 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC14.95□□□□□ -0.02
Trav3-1Q5R1I8 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC14.95□□□□□ -0.02
Trav3-1Q5R1I8 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav3-1Q5R1I8 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav3-1Q5R1I8 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav3-1Q5R1I8 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav3-1Q5R1I8 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav3-1Q5R1I8 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Trav3-1Q5R1I8 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav3-1Q5R1I8 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav3-1Q5R1I8 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav3-1Q5R1I8 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Trav3-1Q5R1I8 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav3-1Q5R1I8 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav3-1Q5R1I8 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav3-1Q5R1I8 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav3-1Q5R1I8 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav3-1Q5R1I8 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav3-1Q5R1I8 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trav3-1Q5R1I8 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav3-1Q5R1I8 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav3-1Q5R1I8 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav3-1Q5R1I8 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav3-1Q5R1I8 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav3-1Q5R1I8 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav3-1Q5R1I8 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav3-1Q5R1I8 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC14.92□□□□□ -0.02
Trav3-1Q5R1I8 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav3-1Q5R1I8 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Trav3-1Q5R1I8 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav3-1Q5R1I8 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav3-1Q5R1I8 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav3-1Q5R1I8 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav3-1Q5R1I8 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav3-1Q5R1I8 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav3-1Q5R1I8 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav3-1Q5R1I8 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav3-1Q5R1I8 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav3-1Q5R1I8 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trav3-1Q5R1I8 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav3-1Q5R1I8 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav3-1Q5R1I8 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav3-1Q5R1I8 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC14.9□□□□□ -0.02
Trav3-1Q5R1I8 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav3-1Q5R1I8 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Trav3-1Q5R1I8 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav3-1Q5R1I8 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav3-1Q5R1I8 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav3-1Q5R1I8 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav3-1Q5R1I8 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav3-1Q5R1I8 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav3-1Q5R1I8 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trav3-1Q5R1I8 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav3-1Q5R1I8 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav3-1Q5R1I8 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav3-1Q5R1I8 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav3-1Q5R1I8 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav3-1Q5R1I8 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav3-1Q5R1I8 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trav3-1Q5R1I8 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav3-1Q5R1I8 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav3-1Q5R1I8 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav3-1Q5R1I8 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC14.88□□□□□ -0.03
Trav3-1Q5R1I8 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav3-1Q5R1I8 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav3-1Q5R1I8 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav3-1Q5R1I8 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Trav3-1Q5R1I8 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 144.4 ms