Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav15-1-dv6-1Q5R1D2 Gm28731-201ENSMUST00000185564 1569 ntBASIC17.02■□□□□ 0.31
Trav15-1-dv6-1Q5R1D2 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav15-1-dv6-1Q5R1D2 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav15-1-dv6-1Q5R1D2 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav15-1-dv6-1Q5R1D2 Nkain2-201ENSMUST00000092602 558 ntBASIC17.01■□□□□ 0.31
Trav15-1-dv6-1Q5R1D2 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trav15-1-dv6-1Q5R1D2 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Trav15-1-dv6-1Q5R1D2 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav15-1-dv6-1Q5R1D2 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav15-1-dv6-1Q5R1D2 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav15-1-dv6-1Q5R1D2 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Trav15-1-dv6-1Q5R1D2 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trav15-1-dv6-1Q5R1D2 Gm9910-201ENSMUST00000195385 1550 ntBASIC17■□□□□ 0.31
Trav15-1-dv6-1Q5R1D2 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav15-1-dv6-1Q5R1D2 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav15-1-dv6-1Q5R1D2 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17■□□□□ 0.31
Trav15-1-dv6-1Q5R1D2 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trav15-1-dv6-1Q5R1D2 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav15-1-dv6-1Q5R1D2 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav15-1-dv6-1Q5R1D2 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav15-1-dv6-1Q5R1D2 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Trav15-1-dv6-1Q5R1D2 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav15-1-dv6-1Q5R1D2 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Trav15-1-dv6-1Q5R1D2 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav15-1-dv6-1Q5R1D2 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Trav15-1-dv6-1Q5R1D2 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC16.99■□□□□ 0.31
Trav15-1-dv6-1Q5R1D2 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav15-1-dv6-1Q5R1D2 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav15-1-dv6-1Q5R1D2 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
Trav15-1-dv6-1Q5R1D2 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav15-1-dv6-1Q5R1D2 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Trav15-1-dv6-1Q5R1D2 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
Trav15-1-dv6-1Q5R1D2 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Trav15-1-dv6-1Q5R1D2 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav15-1-dv6-1Q5R1D2 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav15-1-dv6-1Q5R1D2 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav15-1-dv6-1Q5R1D2 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trav15-1-dv6-1Q5R1D2 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC16.98■□□□□ 0.31
Trav15-1-dv6-1Q5R1D2 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav15-1-dv6-1Q5R1D2 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav15-1-dv6-1Q5R1D2 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav15-1-dv6-1Q5R1D2 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav15-1-dv6-1Q5R1D2 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trav15-1-dv6-1Q5R1D2 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Trav15-1-dv6-1Q5R1D2 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav15-1-dv6-1Q5R1D2 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav15-1-dv6-1Q5R1D2 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav15-1-dv6-1Q5R1D2 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav15-1-dv6-1Q5R1D2 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav15-1-dv6-1Q5R1D2 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Trav15-1-dv6-1Q5R1D2 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trav15-1-dv6-1Q5R1D2 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav15-1-dv6-1Q5R1D2 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trav15-1-dv6-1Q5R1D2 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav15-1-dv6-1Q5R1D2 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav15-1-dv6-1Q5R1D2 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav15-1-dv6-1Q5R1D2 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav15-1-dv6-1Q5R1D2 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav15-1-dv6-1Q5R1D2 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav15-1-dv6-1Q5R1D2 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav15-1-dv6-1Q5R1D2 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav15-1-dv6-1Q5R1D2 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav15-1-dv6-1Q5R1D2 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav15-1-dv6-1Q5R1D2 Gm32051-202ENSMUST00000197905 2385 ntBASIC16.93■□□□□ 0.3
Trav15-1-dv6-1Q5R1D2 AC164433.2-201ENSMUST00000226346 1701 ntBASIC16.93■□□□□ 0.3
Trav15-1-dv6-1Q5R1D2 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Trav15-1-dv6-1Q5R1D2 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC16.92■□□□□ 0.3
Trav15-1-dv6-1Q5R1D2 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trav15-1-dv6-1Q5R1D2 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trav15-1-dv6-1Q5R1D2 Gm22567-201ENSMUST00000175542 342 ntBASIC16.92■□□□□ 0.3
Trav15-1-dv6-1Q5R1D2 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav15-1-dv6-1Q5R1D2 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
Trav15-1-dv6-1Q5R1D2 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trav15-1-dv6-1Q5R1D2 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav15-1-dv6-1Q5R1D2 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav15-1-dv6-1Q5R1D2 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav15-1-dv6-1Q5R1D2 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav15-1-dv6-1Q5R1D2 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav15-1-dv6-1Q5R1D2 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Trav15-1-dv6-1Q5R1D2 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav15-1-dv6-1Q5R1D2 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav15-1-dv6-1Q5R1D2 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav15-1-dv6-1Q5R1D2 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav15-1-dv6-1Q5R1D2 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav15-1-dv6-1Q5R1D2 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Trav15-1-dv6-1Q5R1D2 AC153962.1-201ENSMUST00000218530 1948 ntBASIC16.9■□□□□ 0.3
Trav15-1-dv6-1Q5R1D2 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav15-1-dv6-1Q5R1D2 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Trav15-1-dv6-1Q5R1D2 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav15-1-dv6-1Q5R1D2 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Trav15-1-dv6-1Q5R1D2 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trav15-1-dv6-1Q5R1D2 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC16.89■□□□□ 0.29
Trav15-1-dv6-1Q5R1D2 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav15-1-dv6-1Q5R1D2 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav15-1-dv6-1Q5R1D2 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav15-1-dv6-1Q5R1D2 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav15-1-dv6-1Q5R1D2 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav15-1-dv6-1Q5R1D2 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav15-1-dv6-1Q5R1D2 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms