Protein–RNA interactions for Protein: Q4FJU9

Tmem40, Transmembrane protein 40, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem40Q4FJU9 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tmem40Q4FJU9 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
Tmem40Q4FJU9 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tmem40Q4FJU9 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tmem40Q4FJU9 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tmem40Q4FJU9 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Tmem40Q4FJU9 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.63■□□□□ 0.57
Tmem40Q4FJU9 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tmem40Q4FJU9 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
Tmem40Q4FJU9 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.62■□□□□ 0.57
Tmem40Q4FJU9 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tmem40Q4FJU9 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Tmem40Q4FJU9 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.62■□□□□ 0.57
Tmem40Q4FJU9 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tmem40Q4FJU9 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tmem40Q4FJU9 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tmem40Q4FJU9 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Tmem40Q4FJU9 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tmem40Q4FJU9 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC18.61■□□□□ 0.57
Tmem40Q4FJU9 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Tmem40Q4FJU9 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tmem40Q4FJU9 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tmem40Q4FJU9 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tmem40Q4FJU9 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Tmem40Q4FJU9 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Tmem40Q4FJU9 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Tmem40Q4FJU9 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tmem40Q4FJU9 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Tmem40Q4FJU9 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tmem40Q4FJU9 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tmem40Q4FJU9 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Tmem40Q4FJU9 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tmem40Q4FJU9 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Tmem40Q4FJU9 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Tmem40Q4FJU9 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tmem40Q4FJU9 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Tmem40Q4FJU9 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.59■□□□□ 0.57
Tmem40Q4FJU9 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tmem40Q4FJU9 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tmem40Q4FJU9 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.59■□□□□ 0.57
Tmem40Q4FJU9 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.59■□□□□ 0.57
Tmem40Q4FJU9 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tmem40Q4FJU9 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Tmem40Q4FJU9 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.58■□□□□ 0.56
Tmem40Q4FJU9 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Tmem40Q4FJU9 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tmem40Q4FJU9 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tmem40Q4FJU9 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tmem40Q4FJU9 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Tmem40Q4FJU9 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.57■□□□□ 0.56
Tmem40Q4FJU9 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tmem40Q4FJU9 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tmem40Q4FJU9 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tmem40Q4FJU9 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Tmem40Q4FJU9 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.56■□□□□ 0.56
Tmem40Q4FJU9 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Tmem40Q4FJU9 Gm9959-201ENSMUST00000068277 390 ntBASIC18.56■□□□□ 0.56
Tmem40Q4FJU9 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tmem40Q4FJU9 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tmem40Q4FJU9 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tmem40Q4FJU9 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tmem40Q4FJU9 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.55■□□□□ 0.56
Tmem40Q4FJU9 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.55■□□□□ 0.56
Tmem40Q4FJU9 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Tmem40Q4FJU9 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tmem40Q4FJU9 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Tmem40Q4FJU9 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tmem40Q4FJU9 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tmem40Q4FJU9 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Tmem40Q4FJU9 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tmem40Q4FJU9 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tmem40Q4FJU9 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tmem40Q4FJU9 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tmem40Q4FJU9 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Tmem40Q4FJU9 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tmem40Q4FJU9 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Tmem40Q4FJU9 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Tmem40Q4FJU9 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.51■□□□□ 0.55
Tmem40Q4FJU9 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tmem40Q4FJU9 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tmem40Q4FJU9 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tmem40Q4FJU9 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Tmem40Q4FJU9 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Tmem40Q4FJU9 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tmem40Q4FJU9 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tmem40Q4FJU9 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Tmem40Q4FJU9 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tmem40Q4FJU9 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Tmem40Q4FJU9 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.5■□□□□ 0.55
Tmem40Q4FJU9 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Tmem40Q4FJU9 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.5■□□□□ 0.55
Tmem40Q4FJU9 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tmem40Q4FJU9 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Tmem40Q4FJU9 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Tmem40Q4FJU9 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Tmem40Q4FJU9 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tmem40Q4FJU9 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Tmem40Q4FJU9 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.49■□□□□ 0.55
Tmem40Q4FJU9 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.49■□□□□ 0.55
Tmem40Q4FJU9 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms