Protein–RNA interactions for Protein: Q3UW98

Clca4b, Chloride channel accessory 4B, mousemouse

Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca4bQ3UW98 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Clca4bQ3UW98 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Clca4bQ3UW98 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
Clca4bQ3UW98 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Clca4bQ3UW98 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.09■□□□□ 0.97
Clca4bQ3UW98 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Clca4bQ3UW98 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.08■□□□□ 0.97
Clca4bQ3UW98 Gm37136-201ENSMUST00000194368 194 ntBASIC21.08■□□□□ 0.97
Clca4bQ3UW98 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Clca4bQ3UW98 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
Clca4bQ3UW98 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Clca4bQ3UW98 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
Clca4bQ3UW98 Gm15546-201ENSMUST00000122095 826 ntBASIC21.07■□□□□ 0.96
Clca4bQ3UW98 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Clca4bQ3UW98 Gm5921-201ENSMUST00000075898 882 ntBASIC21.07■□□□□ 0.96
Clca4bQ3UW98 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Clca4bQ3UW98 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Clca4bQ3UW98 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Clca4bQ3UW98 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Clca4bQ3UW98 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Clca4bQ3UW98 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clca4bQ3UW98 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.06■□□□□ 0.96
Clca4bQ3UW98 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.06■□□□□ 0.96
Clca4bQ3UW98 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Clca4bQ3UW98 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Clca4bQ3UW98 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Clca4bQ3UW98 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Clca4bQ3UW98 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.05■□□□□ 0.96
Clca4bQ3UW98 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Clca4bQ3UW98 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Clca4bQ3UW98 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Clca4bQ3UW98 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Clca4bQ3UW98 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Clca4bQ3UW98 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Clca4bQ3UW98 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.04■□□□□ 0.96
Clca4bQ3UW98 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Clca4bQ3UW98 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Clca4bQ3UW98 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Clca4bQ3UW98 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Clca4bQ3UW98 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Clca4bQ3UW98 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Clca4bQ3UW98 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Clca4bQ3UW98 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.03■□□□□ 0.96
Clca4bQ3UW98 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Clca4bQ3UW98 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Clca4bQ3UW98 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Clca4bQ3UW98 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Clca4bQ3UW98 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Clca4bQ3UW98 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Clca4bQ3UW98 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Clca4bQ3UW98 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.02■□□□□ 0.96
Clca4bQ3UW98 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Clca4bQ3UW98 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Clca4bQ3UW98 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Clca4bQ3UW98 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Clca4bQ3UW98 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Clca4bQ3UW98 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Clca4bQ3UW98 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Clca4bQ3UW98 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21■□□□□ 0.95
Clca4bQ3UW98 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Clca4bQ3UW98 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Clca4bQ3UW98 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Clca4bQ3UW98 Gm10420-201ENSMUST00000121713 882 ntBASIC20.99■□□□□ 0.95
Clca4bQ3UW98 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Clca4bQ3UW98 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Clca4bQ3UW98 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Clca4bQ3UW98 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Clca4bQ3UW98 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Clca4bQ3UW98 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Clca4bQ3UW98 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Clca4bQ3UW98 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.97■□□□□ 0.95
Clca4bQ3UW98 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Clca4bQ3UW98 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Clca4bQ3UW98 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.96■□□□□ 0.95
Clca4bQ3UW98 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Clca4bQ3UW98 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Clca4bQ3UW98 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.95■□□□□ 0.95
Clca4bQ3UW98 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Clca4bQ3UW98 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.95■□□□□ 0.94
Clca4bQ3UW98 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Clca4bQ3UW98 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.95■□□□□ 0.94
Clca4bQ3UW98 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Clca4bQ3UW98 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Clca4bQ3UW98 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.95■□□□□ 0.94
Clca4bQ3UW98 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Clca4bQ3UW98 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.95■□□□□ 0.94
Clca4bQ3UW98 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clca4bQ3UW98 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clca4bQ3UW98 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clca4bQ3UW98 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clca4bQ3UW98 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clca4bQ3UW98 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.94■□□□□ 0.94
Clca4bQ3UW98 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clca4bQ3UW98 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clca4bQ3UW98 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clca4bQ3UW98 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Clca4bQ3UW98 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Clca4bQ3UW98 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Clca4bQ3UW98 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Clca4bQ3UW98 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms