Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
Mmp25Q3U435 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Mmp25Q3U435 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Mmp25Q3U435 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Mmp25Q3U435 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Mmp25Q3U435 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mmp25Q3U435 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mmp25Q3U435 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Mmp25Q3U435 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.69■□□□□ 0.9
Mmp25Q3U435 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mmp25Q3U435 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mmp25Q3U435 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mmp25Q3U435 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mmp25Q3U435 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mmp25Q3U435 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mmp25Q3U435 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mmp25Q3U435 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mmp25Q3U435 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.66■□□□□ 0.9
Mmp25Q3U435 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Mmp25Q3U435 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mmp25Q3U435 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.66■□□□□ 0.9
Mmp25Q3U435 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Mmp25Q3U435 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mmp25Q3U435 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.66■□□□□ 0.9
Mmp25Q3U435 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.66■□□□□ 0.9
Mmp25Q3U435 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mmp25Q3U435 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mmp25Q3U435 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mmp25Q3U435 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.65■□□□□ 0.9
Mmp25Q3U435 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Mmp25Q3U435 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mmp25Q3U435 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Mmp25Q3U435 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Mmp25Q3U435 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Mmp25Q3U435 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Mmp25Q3U435 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Mmp25Q3U435 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Mmp25Q3U435 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Mmp25Q3U435 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.64■□□□□ 0.89
Mmp25Q3U435 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Mmp25Q3U435 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.62■□□□□ 0.89
Mmp25Q3U435 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mmp25Q3U435 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mmp25Q3U435 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.62■□□□□ 0.89
Mmp25Q3U435 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mmp25Q3U435 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mmp25Q3U435 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.62■□□□□ 0.89
Mmp25Q3U435 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Mmp25Q3U435 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mmp25Q3U435 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Mmp25Q3U435 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mmp25Q3U435 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mmp25Q3U435 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mmp25Q3U435 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mmp25Q3U435 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.6■□□□□ 0.89
Mmp25Q3U435 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.6■□□□□ 0.89
Mmp25Q3U435 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Mmp25Q3U435 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.6■□□□□ 0.89
Mmp25Q3U435 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mmp25Q3U435 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mmp25Q3U435 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mmp25Q3U435 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mmp25Q3U435 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mmp25Q3U435 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mmp25Q3U435 Gm22567-201ENSMUST00000175542 342 ntBASIC20.59■□□□□ 0.89
Mmp25Q3U435 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mmp25Q3U435 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mmp25Q3U435 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Mmp25Q3U435 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Mmp25Q3U435 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.58■□□□□ 0.89
Mmp25Q3U435 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Mmp25Q3U435 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.58■□□□□ 0.89
Mmp25Q3U435 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.58■□□□□ 0.88
Mmp25Q3U435 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Mmp25Q3U435 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Mmp25Q3U435 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Mmp25Q3U435 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Mmp25Q3U435 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Mmp25Q3U435 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Mmp25Q3U435 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Mmp25Q3U435 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Mmp25Q3U435 Gm5921-201ENSMUST00000075898 882 ntBASIC20.57■□□□□ 0.88
Mmp25Q3U435 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Mmp25Q3U435 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Mmp25Q3U435 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Mmp25Q3U435 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.56■□□□□ 0.88
Mmp25Q3U435 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Mmp25Q3U435 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Mmp25Q3U435 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
Mmp25Q3U435 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Mmp25Q3U435 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Mmp25Q3U435 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Mmp25Q3U435 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Mmp25Q3U435 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.55■□□□□ 0.88
Mmp25Q3U435 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Mmp25Q3U435 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Mmp25Q3U435 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Mmp25Q3U435 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Mmp25Q3U435 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
Mmp25Q3U435 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms