Protein–RNA interactions for Protein: Q3U2C5

Rnf149, E3 ubiquitin-protein ligase RNF149, mousemouse

Predictions only

Length 394 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf149Q3U2C5 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Rnf149Q3U2C5 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
Rnf149Q3U2C5 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.59■□□□□ 0.73
Rnf149Q3U2C5 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf149Q3U2C5 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
Rnf149Q3U2C5 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf149Q3U2C5 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
Rnf149Q3U2C5 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Rnf149Q3U2C5 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rnf149Q3U2C5 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Rnf149Q3U2C5 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rnf149Q3U2C5 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Rnf149Q3U2C5 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
Rnf149Q3U2C5 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.57■□□□□ 0.72
Rnf149Q3U2C5 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf149Q3U2C5 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Rnf149Q3U2C5 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf149Q3U2C5 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf149Q3U2C5 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf149Q3U2C5 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.55■□□□□ 0.72
Rnf149Q3U2C5 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf149Q3U2C5 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf149Q3U2C5 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC19.55■□□□□ 0.72
Rnf149Q3U2C5 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf149Q3U2C5 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Rnf149Q3U2C5 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf149Q3U2C5 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf149Q3U2C5 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf149Q3U2C5 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.54■□□□□ 0.72
Rnf149Q3U2C5 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf149Q3U2C5 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf149Q3U2C5 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf149Q3U2C5 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf149Q3U2C5 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf149Q3U2C5 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Rnf149Q3U2C5 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf149Q3U2C5 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.52■□□□□ 0.72
Rnf149Q3U2C5 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rnf149Q3U2C5 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.52■□□□□ 0.72
Rnf149Q3U2C5 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.52■□□□□ 0.72
Rnf149Q3U2C5 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rnf149Q3U2C5 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rnf149Q3U2C5 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rnf149Q3U2C5 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rnf149Q3U2C5 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rnf149Q3U2C5 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rnf149Q3U2C5 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Rnf149Q3U2C5 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Rnf149Q3U2C5 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf149Q3U2C5 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf149Q3U2C5 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf149Q3U2C5 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf149Q3U2C5 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf149Q3U2C5 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rnf149Q3U2C5 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rnf149Q3U2C5 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rnf149Q3U2C5 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rnf149Q3U2C5 Gm37136-201ENSMUST00000194368 194 ntBASIC19.5■□□□□ 0.71
Rnf149Q3U2C5 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.5■□□□□ 0.71
Rnf149Q3U2C5 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rnf149Q3U2C5 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
Rnf149Q3U2C5 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf149Q3U2C5 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Rnf149Q3U2C5 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf149Q3U2C5 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Rnf149Q3U2C5 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf149Q3U2C5 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf149Q3U2C5 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf149Q3U2C5 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf149Q3U2C5 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf149Q3U2C5 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Rnf149Q3U2C5 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf149Q3U2C5 Gm4799-201ENSMUST00000095396 657 ntBASIC19.47■□□□□ 0.71
Rnf149Q3U2C5 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf149Q3U2C5 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf149Q3U2C5 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf149Q3U2C5 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf149Q3U2C5 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf149Q3U2C5 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Rnf149Q3U2C5 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf149Q3U2C5 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf149Q3U2C5 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf149Q3U2C5 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.44■□□□□ 0.7
Rnf149Q3U2C5 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.44■□□□□ 0.7
Rnf149Q3U2C5 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.44■□□□□ 0.7
Rnf149Q3U2C5 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf149Q3U2C5 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf149Q3U2C5 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.43■□□□□ 0.7
Rnf149Q3U2C5 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf149Q3U2C5 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf149Q3U2C5 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.43■□□□□ 0.7
Rnf149Q3U2C5 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf149Q3U2C5 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf149Q3U2C5 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
Rnf149Q3U2C5 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf149Q3U2C5 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf149Q3U2C5 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.42■□□□□ 0.7
Rnf149Q3U2C5 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.42■□□□□ 0.7
Rnf149Q3U2C5 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf149Q3U2C5 Gm6311-201ENSMUST00000073790 878 ntBASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms