Protein–RNA interactions for Protein: Q3TC46

Patl1, Protein PAT1 homolog 1, mousemouse

Known RBP Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Patl1Q3TC46 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Patl1Q3TC46 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.8■□□□□ 0.92
Patl1Q3TC46 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Patl1Q3TC46 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
Patl1Q3TC46 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Patl1Q3TC46 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Patl1Q3TC46 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Patl1Q3TC46 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Patl1Q3TC46 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Patl1Q3TC46 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.78■□□□□ 0.92
Patl1Q3TC46 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Patl1Q3TC46 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Patl1Q3TC46 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Patl1Q3TC46 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Patl1Q3TC46 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Patl1Q3TC46 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Patl1Q3TC46 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Patl1Q3TC46 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Patl1Q3TC46 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Patl1Q3TC46 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Patl1Q3TC46 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Patl1Q3TC46 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
Patl1Q3TC46 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Patl1Q3TC46 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.75■□□□□ 0.91
Patl1Q3TC46 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.75■□□□□ 0.91
Patl1Q3TC46 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Patl1Q3TC46 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Patl1Q3TC46 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Patl1Q3TC46 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Patl1Q3TC46 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Patl1Q3TC46 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Patl1Q3TC46 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Patl1Q3TC46 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Patl1Q3TC46 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Patl1Q3TC46 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.73■□□□□ 0.91
Patl1Q3TC46 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Patl1Q3TC46 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Patl1Q3TC46 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.72■□□□□ 0.91
Patl1Q3TC46 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Patl1Q3TC46 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Patl1Q3TC46 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Patl1Q3TC46 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Patl1Q3TC46 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Patl1Q3TC46 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.71■□□□□ 0.91
Patl1Q3TC46 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Patl1Q3TC46 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Patl1Q3TC46 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.7■□□□□ 0.9
Patl1Q3TC46 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Patl1Q3TC46 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Patl1Q3TC46 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Patl1Q3TC46 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.7■□□□□ 0.9
Patl1Q3TC46 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Patl1Q3TC46 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Patl1Q3TC46 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Patl1Q3TC46 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.69■□□□□ 0.9
Patl1Q3TC46 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Patl1Q3TC46 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Patl1Q3TC46 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Patl1Q3TC46 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Patl1Q3TC46 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Patl1Q3TC46 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Patl1Q3TC46 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Patl1Q3TC46 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Patl1Q3TC46 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Patl1Q3TC46 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Patl1Q3TC46 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Patl1Q3TC46 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Patl1Q3TC46 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Patl1Q3TC46 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Patl1Q3TC46 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Patl1Q3TC46 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Patl1Q3TC46 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Patl1Q3TC46 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Patl1Q3TC46 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Patl1Q3TC46 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
Patl1Q3TC46 Gm45855-201ENSMUST00000212546 880 ntBASIC20.66■□□□□ 0.9
Patl1Q3TC46 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Patl1Q3TC46 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Patl1Q3TC46 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Patl1Q3TC46 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Patl1Q3TC46 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Patl1Q3TC46 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Patl1Q3TC46 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.64■□□□□ 0.9
Patl1Q3TC46 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Patl1Q3TC46 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Patl1Q3TC46 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Patl1Q3TC46 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Patl1Q3TC46 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Patl1Q3TC46 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Patl1Q3TC46 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Patl1Q3TC46 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Patl1Q3TC46 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Patl1Q3TC46 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Patl1Q3TC46 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Patl1Q3TC46 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
Patl1Q3TC46 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Patl1Q3TC46 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Patl1Q3TC46 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Patl1Q3TC46 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Patl1Q3TC46 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms