Protein–RNA interactions for Protein: P97789

Xrn1, 5'-3' exoribonuclease 1, mousemouse

Known RBP Predictions only

Length 1,719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrn1P97789 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Xrn1P97789 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC32.49■■■□□ 2.79
Xrn1P97789 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC32.49■■■□□ 2.79
Xrn1P97789 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
Xrn1P97789 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC32.48■■■□□ 2.79
Xrn1P97789 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
Xrn1P97789 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Xrn1P97789 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Xrn1P97789 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Xrn1P97789 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Xrn1P97789 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC32.46■■■□□ 2.79
Xrn1P97789 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Xrn1P97789 Nsd1-206ENSMUST00000224918 1001 ntBASIC32.46■■■□□ 2.79
Xrn1P97789 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
Xrn1P97789 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC32.45■■■□□ 2.78
Xrn1P97789 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC32.45■■■□□ 2.78
Xrn1P97789 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC32.45■■■□□ 2.78
Xrn1P97789 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.78
Xrn1P97789 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
Xrn1P97789 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC32.44■■■□□ 2.78
Xrn1P97789 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC32.44■■■□□ 2.78
Xrn1P97789 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC32.44■■■□□ 2.78
Xrn1P97789 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
Xrn1P97789 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC32.44■■■□□ 2.78
Xrn1P97789 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
Xrn1P97789 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Xrn1P97789 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
Xrn1P97789 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC32.43■■■□□ 2.78
Xrn1P97789 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC32.43■■■□□ 2.78
Xrn1P97789 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC32.43■■■□□ 2.78
Xrn1P97789 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC32.41■■■□□ 2.78
Xrn1P97789 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC32.41■■■□□ 2.78
Xrn1P97789 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Xrn1P97789 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC32.41■■■□□ 2.78
Xrn1P97789 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
Xrn1P97789 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Xrn1P97789 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC32.39■■■□□ 2.78
Xrn1P97789 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Xrn1P97789 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Xrn1P97789 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Xrn1P97789 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Xrn1P97789 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Xrn1P97789 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC32.37■■■□□ 2.77
Xrn1P97789 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Xrn1P97789 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC32.37■■■□□ 2.77
Xrn1P97789 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC32.37■■■□□ 2.77
Xrn1P97789 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC32.37■■■□□ 2.77
Xrn1P97789 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC32.36■■■□□ 2.77
Xrn1P97789 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
Xrn1P97789 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
Xrn1P97789 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC32.34■■■□□ 2.77
Xrn1P97789 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Xrn1P97789 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
Xrn1P97789 Gm22238-201ENSMUST00000175222 88 ntBASIC32.33■■■□□ 2.77
Xrn1P97789 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC32.33■■■□□ 2.77
Xrn1P97789 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC32.32■■■□□ 2.76
Xrn1P97789 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
Xrn1P97789 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
Xrn1P97789 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC32.31■■■□□ 2.76
Xrn1P97789 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC32.31■■■□□ 2.76
Xrn1P97789 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
Xrn1P97789 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC32.3■■■□□ 2.76
Xrn1P97789 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC32.3■■■□□ 2.76
Xrn1P97789 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC32.3■■■□□ 2.76
Xrn1P97789 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
Xrn1P97789 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC32.3■■■□□ 2.76
Xrn1P97789 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC32.3■■■□□ 2.76
Xrn1P97789 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC32.29■■■□□ 2.76
Xrn1P97789 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC32.29■■■□□ 2.76
Xrn1P97789 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
Xrn1P97789 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
Xrn1P97789 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC32.28■■■□□ 2.76
Xrn1P97789 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Xrn1P97789 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Xrn1P97789 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
Xrn1P97789 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
Xrn1P97789 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
Xrn1P97789 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC32.26■■■□□ 2.75
Xrn1P97789 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
Xrn1P97789 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC32.26■■■□□ 2.75
Xrn1P97789 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC32.26■■■□□ 2.75
Xrn1P97789 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
Xrn1P97789 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC32.26■■■□□ 2.75
Xrn1P97789 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC32.26■■■□□ 2.75
Xrn1P97789 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Xrn1P97789 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC32.25■■■□□ 2.75
Xrn1P97789 AC117245.4-201ENSMUST00000217388 1646 ntBASIC32.25■■■□□ 2.75
Xrn1P97789 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC32.25■■■□□ 2.75
Xrn1P97789 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC32.25■■■□□ 2.75
Xrn1P97789 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC32.25■■■□□ 2.75
Xrn1P97789 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
Xrn1P97789 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC32.24■■■□□ 2.75
Xrn1P97789 Gm13241-201ENSMUST00000094493 780 ntBASIC32.24■■■□□ 2.75
Xrn1P97789 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC32.23■■■□□ 2.75
Xrn1P97789 Gm28536-201ENSMUST00000190971 1317 ntBASIC32.23■■■□□ 2.75
Xrn1P97789 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Xrn1P97789 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC32.22■■■□□ 2.75
Xrn1P97789 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Xrn1P97789 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Xrn1P97789 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms