Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Lsm3P62311 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Lsm3P62311 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Lsm3P62311 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.01■□□□□ 0.79
Lsm3P62311 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Lsm3P62311 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lsm3P62311 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Lsm3P62311 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Lsm3P62311 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Lsm3P62311 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Lsm3P62311 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Lsm3P62311 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Lsm3P62311 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Lsm3P62311 Gm43863-201ENSMUST00000203822 1192 ntBASIC20■□□□□ 0.79
Lsm3P62311 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20■□□□□ 0.79
Lsm3P62311 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Lsm3P62311 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20■□□□□ 0.79
Lsm3P62311 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20■□□□□ 0.79
Lsm3P62311 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20■□□□□ 0.79
Lsm3P62311 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lsm3P62311 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.99■□□□□ 0.79
Lsm3P62311 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lsm3P62311 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lsm3P62311 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.99■□□□□ 0.79
Lsm3P62311 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lsm3P62311 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lsm3P62311 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lsm3P62311 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lsm3P62311 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Lsm3P62311 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lsm3P62311 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lsm3P62311 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lsm3P62311 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lsm3P62311 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lsm3P62311 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lsm3P62311 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.97■□□□□ 0.79
Lsm3P62311 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lsm3P62311 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lsm3P62311 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lsm3P62311 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lsm3P62311 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lsm3P62311 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lsm3P62311 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.95■□□□□ 0.78
Lsm3P62311 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Lsm3P62311 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lsm3P62311 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Lsm3P62311 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lsm3P62311 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lsm3P62311 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lsm3P62311 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lsm3P62311 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Lsm3P62311 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lsm3P62311 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.93■□□□□ 0.78
Lsm3P62311 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lsm3P62311 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Lsm3P62311 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lsm3P62311 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.93■□□□□ 0.78
Lsm3P62311 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lsm3P62311 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Lsm3P62311 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lsm3P62311 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Lsm3P62311 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lsm3P62311 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.92■□□□□ 0.78
Lsm3P62311 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lsm3P62311 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Lsm3P62311 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Lsm3P62311 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.92■□□□□ 0.78
Lsm3P62311 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lsm3P62311 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Lsm3P62311 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.91■□□□□ 0.78
Lsm3P62311 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Lsm3P62311 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lsm3P62311 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lsm3P62311 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lsm3P62311 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lsm3P62311 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Lsm3P62311 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lsm3P62311 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
Lsm3P62311 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lsm3P62311 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lsm3P62311 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lsm3P62311 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lsm3P62311 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lsm3P62311 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Lsm3P62311 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Lsm3P62311 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Lsm3P62311 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lsm3P62311 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Lsm3P62311 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lsm3P62311 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lsm3P62311 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.87■□□□□ 0.77
Lsm3P62311 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lsm3P62311 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Lsm3P62311 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lsm3P62311 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Lsm3P62311 Gm24804-201ENSMUST00000174982 85 ntBASIC19.86■□□□□ 0.77
Lsm3P62311 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lsm3P62311 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.86■□□□□ 0.77
Lsm3P62311 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lsm3P62311 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms