Protein–RNA interactions for Protein: P48030

Tgfa, Protransforming growth factor alpha, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TgfaP48030 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TgfaP48030 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TgfaP48030 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TgfaP48030 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TgfaP48030 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TgfaP48030 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.22■□□□□ 0.67
TgfaP48030 Gm9847-201ENSMUST00000052528 599 ntBASIC19.22■□□□□ 0.67
TgfaP48030 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
TgfaP48030 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TgfaP48030 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.21■□□□□ 0.67
TgfaP48030 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
TgfaP48030 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
TgfaP48030 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TgfaP48030 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TgfaP48030 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.21■□□□□ 0.67
TgfaP48030 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TgfaP48030 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
TgfaP48030 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TgfaP48030 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TgfaP48030 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TgfaP48030 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TgfaP48030 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
TgfaP48030 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TgfaP48030 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TgfaP48030 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
TgfaP48030 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TgfaP48030 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TgfaP48030 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.17■□□□□ 0.66
TgfaP48030 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.17■□□□□ 0.66
TgfaP48030 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.17■□□□□ 0.66
TgfaP48030 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TgfaP48030 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TgfaP48030 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
TgfaP48030 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TgfaP48030 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TgfaP48030 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TgfaP48030 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TgfaP48030 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TgfaP48030 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TgfaP48030 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TgfaP48030 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TgfaP48030 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.15■□□□□ 0.66
TgfaP48030 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
TgfaP48030 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TgfaP48030 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TgfaP48030 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TgfaP48030 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TgfaP48030 Gm22238-201ENSMUST00000175222 88 ntBASIC19.14■□□□□ 0.65
TgfaP48030 Serp2-204ENSMUST00000228055 705 ntBASIC19.14■□□□□ 0.65
TgfaP48030 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.14■□□□□ 0.65
TgfaP48030 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TgfaP48030 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.13■□□□□ 0.65
TgfaP48030 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.13■□□□□ 0.65
TgfaP48030 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.13■□□□□ 0.65
TgfaP48030 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.13■□□□□ 0.65
TgfaP48030 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
TgfaP48030 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TgfaP48030 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.12■□□□□ 0.65
TgfaP48030 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TgfaP48030 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TgfaP48030 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TgfaP48030 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TgfaP48030 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TgfaP48030 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TgfaP48030 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
TgfaP48030 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TgfaP48030 Gm40881-201ENSMUST00000223397 166 ntBASIC19.12■□□□□ 0.65
TgfaP48030 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TgfaP48030 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TgfaP48030 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TgfaP48030 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.11■□□□□ 0.65
TgfaP48030 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TgfaP48030 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.11■□□□□ 0.65
TgfaP48030 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.11■□□□□ 0.65
TgfaP48030 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.11■□□□□ 0.65
TgfaP48030 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TgfaP48030 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TgfaP48030 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TgfaP48030 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.1■□□□□ 0.65
TgfaP48030 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TgfaP48030 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TgfaP48030 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TgfaP48030 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
TgfaP48030 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TgfaP48030 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TgfaP48030 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TgfaP48030 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TgfaP48030 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.08■□□□□ 0.64
TgfaP48030 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
TgfaP48030 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
TgfaP48030 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
TgfaP48030 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TgfaP48030 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.07■□□□□ 0.64
TgfaP48030 Gm21956-201ENSMUST00000179946 522 ntBASIC19.07■□□□□ 0.64
TgfaP48030 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TgfaP48030 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TgfaP48030 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
TgfaP48030 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.06■□□□□ 0.64
TgfaP48030 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.06■□□□□ 0.64
TgfaP48030 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms