Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.79■□□□□ 0.92
Nkx2-6P43688 Rps24-207ENSMUST00000224568 714 ntBASIC20.79■□□□□ 0.92
Nkx2-6P43688 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Nkx2-6P43688 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nkx2-6P43688 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nkx2-6P43688 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nkx2-6P43688 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nkx2-6P43688 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Nkx2-6P43688 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Nkx2-6P43688 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nkx2-6P43688 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Nkx2-6P43688 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nkx2-6P43688 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Nkx2-6P43688 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nkx2-6P43688 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nkx2-6P43688 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Nkx2-6P43688 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nkx2-6P43688 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Nkx2-6P43688 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nkx2-6P43688 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nkx2-6P43688 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nkx2-6P43688 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nkx2-6P43688 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Nkx2-6P43688 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Nkx2-6P43688 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.75■□□□□ 0.91
Nkx2-6P43688 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Nkx2-6P43688 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nkx2-6P43688 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Nkx2-6P43688 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nkx2-6P43688 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nkx2-6P43688 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.74■□□□□ 0.91
Nkx2-6P43688 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.74■□□□□ 0.91
Nkx2-6P43688 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nkx2-6P43688 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nkx2-6P43688 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nkx2-6P43688 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nkx2-6P43688 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nkx2-6P43688 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Nkx2-6P43688 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nkx2-6P43688 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nkx2-6P43688 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Nkx2-6P43688 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Nkx2-6P43688 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nkx2-6P43688 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Nkx2-6P43688 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nkx2-6P43688 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Nkx2-6P43688 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Nkx2-6P43688 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.72■□□□□ 0.91
Nkx2-6P43688 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Nkx2-6P43688 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Nkx2-6P43688 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nkx2-6P43688 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Nkx2-6P43688 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nkx2-6P43688 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nkx2-6P43688 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nkx2-6P43688 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Nkx2-6P43688 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.7■□□□□ 0.91
Nkx2-6P43688 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.7■□□□□ 0.9
Nkx2-6P43688 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Nkx2-6P43688 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Nkx2-6P43688 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Nkx2-6P43688 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nkx2-6P43688 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nkx2-6P43688 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
Nkx2-6P43688 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nkx2-6P43688 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nkx2-6P43688 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Nkx2-6P43688 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nkx2-6P43688 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nkx2-6P43688 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Nkx2-6P43688 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Nkx2-6P43688 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nkx2-6P43688 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nkx2-6P43688 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Nkx2-6P43688 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.66■□□□□ 0.9
Nkx2-6P43688 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.66■□□□□ 0.9
Nkx2-6P43688 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nkx2-6P43688 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nkx2-6P43688 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nkx2-6P43688 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nkx2-6P43688 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nkx2-6P43688 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nkx2-6P43688 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.65■□□□□ 0.9
Nkx2-6P43688 Gm10232-201ENSMUST00000089221 720 ntBASIC20.65■□□□□ 0.9
Nkx2-6P43688 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Nkx2-6P43688 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nkx2-6P43688 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Nkx2-6P43688 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nkx2-6P43688 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.64■□□□□ 0.89
Nkx2-6P43688 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nkx2-6P43688 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nkx2-6P43688 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nkx2-6P43688 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nkx2-6P43688 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nkx2-6P43688 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Nkx2-6P43688 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nkx2-6P43688 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nkx2-6P43688 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Nkx2-6P43688 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Nkx2-6P43688 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms