Protein–RNA interactions for Protein: P06320

T-cell receptor beta chain V region CTL-F3, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06320 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
P06320 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC13.86□□□□□ -0.19
P06320 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
P06320 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
P06320 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
P06320 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
P06320 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
P06320 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
P06320 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
P06320 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
P06320 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC13.85□□□□□ -0.19
P06320 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
P06320 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
P06320 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
P06320 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
P06320 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
P06320 Dmtn-209ENSMUST00000228295 2572 ntBASIC13.84□□□□□ -0.19
P06320 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
P06320 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
P06320 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
P06320 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
P06320 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
P06320 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
P06320 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
P06320 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
P06320 Gm6934-201ENSMUST00000194780 1905 ntBASIC13.84□□□□□ -0.19
P06320 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
P06320 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
P06320 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
P06320 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
P06320 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
P06320 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
P06320 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
P06320 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC13.83□□□□□ -0.2
P06320 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
P06320 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
P06320 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
P06320 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
P06320 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
P06320 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
P06320 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
P06320 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
P06320 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
P06320 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
P06320 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
P06320 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
P06320 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
P06320 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
P06320 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
P06320 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
P06320 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
P06320 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
P06320 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
P06320 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
P06320 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
P06320 Gm14121-201ENSMUST00000121441 1380 ntBASIC13.81□□□□□ -0.2
P06320 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
P06320 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
P06320 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
P06320 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
P06320 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
P06320 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
P06320 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
P06320 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
P06320 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
P06320 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
P06320 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
P06320 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC13.79□□□□□ -0.2
P06320 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
P06320 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
P06320 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
P06320 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
P06320 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
P06320 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
P06320 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
P06320 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC13.77□□□□□ -0.2
P06320 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
P06320 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
P06320 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
P06320 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
P06320 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
P06320 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
P06320 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
P06320 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC13.76□□□□□ -0.21
P06320 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC13.76□□□□□ -0.21
P06320 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
P06320 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
P06320 Gm26766-202ENSMUST00000227544 2347 ntBASIC13.76□□□□□ -0.21
P06320 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
P06320 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
P06320 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC13.76□□□□□ -0.21
P06320 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
P06320 Gm4419-202ENSMUST00000226239 1431 ntBASIC13.75□□□□□ -0.21
P06320 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC13.75□□□□□ -0.21
P06320 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
P06320 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC13.75□□□□□ -0.21
P06320 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
P06320 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
P06320 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
P06320 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms