Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CfdP03953 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CfdP03953 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CfdP03953 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CfdP03953 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CfdP03953 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CfdP03953 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CfdP03953 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CfdP03953 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CfdP03953 Tdp2-203ENSMUST00000223804 1136 ntBASIC18.34■□□□□ 0.53
CfdP03953 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CfdP03953 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CfdP03953 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CfdP03953 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.33■□□□□ 0.53
CfdP03953 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CfdP03953 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CfdP03953 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.33■□□□□ 0.52
CfdP03953 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
CfdP03953 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CfdP03953 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CfdP03953 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.33■□□□□ 0.52
CfdP03953 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CfdP03953 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CfdP03953 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CfdP03953 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CfdP03953 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CfdP03953 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CfdP03953 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CfdP03953 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CfdP03953 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CfdP03953 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
CfdP03953 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CfdP03953 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.3■□□□□ 0.52
CfdP03953 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
CfdP03953 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CfdP03953 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CfdP03953 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CfdP03953 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.29■□□□□ 0.52
CfdP03953 Gm45855-201ENSMUST00000212546 880 ntBASIC18.29■□□□□ 0.52
CfdP03953 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CfdP03953 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.29■□□□□ 0.52
CfdP03953 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CfdP03953 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CfdP03953 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CfdP03953 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CfdP03953 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CfdP03953 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CfdP03953 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CfdP03953 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CfdP03953 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC18.28■□□□□ 0.52
CfdP03953 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CfdP03953 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CfdP03953 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CfdP03953 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CfdP03953 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CfdP03953 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CfdP03953 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CfdP03953 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CfdP03953 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
CfdP03953 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC18.26■□□□□ 0.51
CfdP03953 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CfdP03953 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CfdP03953 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CfdP03953 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CfdP03953 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CfdP03953 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.25■□□□□ 0.51
CfdP03953 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CfdP03953 Gm22567-201ENSMUST00000175542 342 ntBASIC18.25■□□□□ 0.51
CfdP03953 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CfdP03953 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CfdP03953 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CfdP03953 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CfdP03953 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CfdP03953 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CfdP03953 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CfdP03953 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CfdP03953 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CfdP03953 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CfdP03953 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CfdP03953 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CfdP03953 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CfdP03953 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CfdP03953 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
CfdP03953 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CfdP03953 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
CfdP03953 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CfdP03953 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CfdP03953 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CfdP03953 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CfdP03953 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CfdP03953 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CfdP03953 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CfdP03953 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC18.21■□□□□ 0.51
CfdP03953 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CfdP03953 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CfdP03953 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
CfdP03953 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
CfdP03953 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CfdP03953 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CfdP03953 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 10.6 ms