Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC18.93■□□□□ 0.62
Dkk1O54908 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Dkk1O54908 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Dkk1O54908 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Dkk1O54908 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Dkk1O54908 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Dkk1O54908 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Dkk1O54908 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Dkk1O54908 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Dkk1O54908 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Dkk1O54908 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.9■□□□□ 0.62
Dkk1O54908 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Dkk1O54908 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Dkk1O54908 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Dkk1O54908 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Dkk1O54908 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Dkk1O54908 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC18.89■□□□□ 0.61
Dkk1O54908 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Dkk1O54908 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Dkk1O54908 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
Dkk1O54908 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Dkk1O54908 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Dkk1O54908 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Dkk1O54908 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Dkk1O54908 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Dkk1O54908 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Dkk1O54908 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Dkk1O54908 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Dkk1O54908 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Dkk1O54908 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Dkk1O54908 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.87■□□□□ 0.61
Dkk1O54908 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Dkk1O54908 AC117245.4-201ENSMUST00000217388 1646 ntBASIC18.87■□□□□ 0.61
Dkk1O54908 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Dkk1O54908 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Dkk1O54908 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.86■□□□□ 0.61
Dkk1O54908 Gm21156-201ENSMUST00000189693 869 ntBASIC18.86■□□□□ 0.61
Dkk1O54908 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC18.86■□□□□ 0.61
Dkk1O54908 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Dkk1O54908 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Dkk1O54908 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Dkk1O54908 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Dkk1O54908 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Dkk1O54908 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Dkk1O54908 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Dkk1O54908 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Dkk1O54908 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Dkk1O54908 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Dkk1O54908 Gm10420-201ENSMUST00000121713 882 ntBASIC18.84■□□□□ 0.61
Dkk1O54908 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.84■□□□□ 0.61
Dkk1O54908 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Dkk1O54908 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Dkk1O54908 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Dkk1O54908 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Dkk1O54908 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Dkk1O54908 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Dkk1O54908 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Dkk1O54908 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Dkk1O54908 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Dkk1O54908 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Dkk1O54908 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Dkk1O54908 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Dkk1O54908 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Dkk1O54908 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Dkk1O54908 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Dkk1O54908 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Dkk1O54908 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Dkk1O54908 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Dkk1O54908 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Dkk1O54908 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Dkk1O54908 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Dkk1O54908 Gm22567-201ENSMUST00000175542 342 ntBASIC18.81■□□□□ 0.6
Dkk1O54908 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Dkk1O54908 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Dkk1O54908 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Dkk1O54908 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Dkk1O54908 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Dkk1O54908 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Dkk1O54908 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.8■□□□□ 0.6
Dkk1O54908 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Dkk1O54908 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.8■□□□□ 0.6
Dkk1O54908 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Dkk1O54908 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Dkk1O54908 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Dkk1O54908 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Dkk1O54908 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Dkk1O54908 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Dkk1O54908 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC18.79■□□□□ 0.6
Dkk1O54908 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
Dkk1O54908 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.79■□□□□ 0.6
Dkk1O54908 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Dkk1O54908 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Dkk1O54908 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Dkk1O54908 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Dkk1O54908 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Dkk1O54908 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Dkk1O54908 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Dkk1O54908 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Dkk1O54908 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Dkk1O54908 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms