Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Col15a1O35206 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Col15a1O35206 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Col15a1O35206 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Col15a1O35206 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC28.89■■■□□ 2.21
Col15a1O35206 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Col15a1O35206 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
Col15a1O35206 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC28.88■■■□□ 2.21
Col15a1O35206 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC28.88■■■□□ 2.21
Col15a1O35206 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Col15a1O35206 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC28.87■■■□□ 2.21
Col15a1O35206 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC28.87■■■□□ 2.21
Col15a1O35206 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC28.86■■■□□ 2.21
Col15a1O35206 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC28.86■■■□□ 2.21
Col15a1O35206 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC28.85■■■□□ 2.21
Col15a1O35206 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC28.84■■■□□ 2.21
Col15a1O35206 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
Col15a1O35206 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Col15a1O35206 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Col15a1O35206 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
Col15a1O35206 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC28.83■■■□□ 2.21
Col15a1O35206 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC28.83■■■□□ 2.21
Col15a1O35206 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Col15a1O35206 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC28.83■■■□□ 2.21
Col15a1O35206 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Col15a1O35206 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
Col15a1O35206 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Col15a1O35206 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC28.82■■■□□ 2.2
Col15a1O35206 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Col15a1O35206 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Col15a1O35206 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Col15a1O35206 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC28.81■■■□□ 2.2
Col15a1O35206 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Col15a1O35206 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC28.8■■■□□ 2.2
Col15a1O35206 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Col15a1O35206 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC28.79■■■□□ 2.2
Col15a1O35206 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Col15a1O35206 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Col15a1O35206 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Col15a1O35206 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC28.78■■■□□ 2.2
Col15a1O35206 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Col15a1O35206 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Col15a1O35206 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Col15a1O35206 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Col15a1O35206 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC28.77■■■□□ 2.2
Col15a1O35206 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Col15a1O35206 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Col15a1O35206 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC28.76■■■□□ 2.2
Col15a1O35206 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
Col15a1O35206 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC28.76■■■□□ 2.19
Col15a1O35206 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC28.76■■■□□ 2.19
Col15a1O35206 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Col15a1O35206 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
Col15a1O35206 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC28.75■■■□□ 2.19
Col15a1O35206 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Col15a1O35206 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC28.74■■■□□ 2.19
Col15a1O35206 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC28.74■■■□□ 2.19
Col15a1O35206 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC28.73■■■□□ 2.19
Col15a1O35206 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Col15a1O35206 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Col15a1O35206 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Col15a1O35206 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
Col15a1O35206 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Col15a1O35206 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.19
Col15a1O35206 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC28.72■■■□□ 2.19
Col15a1O35206 AC153524.1-201ENSMUST00000220436 1935 ntBASIC28.72■■■□□ 2.19
Col15a1O35206 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
Col15a1O35206 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.19
Col15a1O35206 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC28.72■■■□□ 2.19
Col15a1O35206 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Col15a1O35206 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Col15a1O35206 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Col15a1O35206 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC28.7■■■□□ 2.19
Col15a1O35206 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
Col15a1O35206 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC28.7■■■□□ 2.18
Col15a1O35206 Gm7417-201ENSMUST00000192950 473 ntBASIC28.7■■■□□ 2.18
Col15a1O35206 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC28.7■■■□□ 2.18
Col15a1O35206 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Col15a1O35206 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
Col15a1O35206 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
Col15a1O35206 Nsd1-206ENSMUST00000224918 1001 ntBASIC28.69■■■□□ 2.18
Col15a1O35206 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Col15a1O35206 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC28.68■■■□□ 2.18
Col15a1O35206 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC28.68■■■□□ 2.18
Col15a1O35206 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC28.68■■■□□ 2.18
Col15a1O35206 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Col15a1O35206 Gm28536-201ENSMUST00000190971 1317 ntBASIC28.67■■■□□ 2.18
Col15a1O35206 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC28.66■■■□□ 2.18
Col15a1O35206 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Col15a1O35206 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC28.65■■■□□ 2.18
Col15a1O35206 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Col15a1O35206 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC28.64■■■□□ 2.18
Col15a1O35206 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC28.64■■■□□ 2.18
Col15a1O35206 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC28.64■■■□□ 2.17
Col15a1O35206 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
Col15a1O35206 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Col15a1O35206 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC28.63■■■□□ 2.17
Col15a1O35206 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC28.63■■■□□ 2.17
Col15a1O35206 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC28.63■■■□□ 2.17
Col15a1O35206 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC28.62■■■□□ 2.17
Retrieved 100 of 76,532 protein–RNA pairs in 111.2 ms