Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
Hdac1O09106 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Hdac1O09106 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Hdac1O09106 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC26.28■■□□□ 1.8
Hdac1O09106 Mir3960-201ENSMUST00000198213 73 ntBASIC26.28■■□□□ 1.8
Hdac1O09106 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Hdac1O09106 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Hdac1O09106 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Hdac1O09106 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Hdac1O09106 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Hdac1O09106 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC26.27■■□□□ 1.8
Hdac1O09106 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC26.26■■□□□ 1.79
Hdac1O09106 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC26.26■■□□□ 1.79
Hdac1O09106 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
Hdac1O09106 AC153524.1-201ENSMUST00000220436 1935 ntBASIC26.26■■□□□ 1.79
Hdac1O09106 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Hdac1O09106 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Hdac1O09106 Gm45364-201ENSMUST00000210883 159 ntBASIC26.25■■□□□ 1.79
Hdac1O09106 Terc-201ENSMUST00000082862 423 ntBASIC26.25■■□□□ 1.79
Hdac1O09106 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Hdac1O09106 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Hdac1O09106 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Hdac1O09106 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC26.24■■□□□ 1.79
Hdac1O09106 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Hdac1O09106 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Hdac1O09106 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Hdac1O09106 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Hdac1O09106 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Hdac1O09106 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
Hdac1O09106 AC154454.1-201ENSMUST00000225253 216 ntBASIC26.24■■□□□ 1.79
Hdac1O09106 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Hdac1O09106 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
Hdac1O09106 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC26.23■■□□□ 1.79
Hdac1O09106 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Hdac1O09106 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Hdac1O09106 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC26.22■■□□□ 1.79
Hdac1O09106 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Hdac1O09106 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Hdac1O09106 Gm38160-201ENSMUST00000193090 2499 ntBASIC26.21■■□□□ 1.79
Hdac1O09106 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
Hdac1O09106 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Hdac1O09106 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Hdac1O09106 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC26.2■■□□□ 1.79
Hdac1O09106 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Hdac1O09106 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Hdac1O09106 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
Hdac1O09106 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Hdac1O09106 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
Hdac1O09106 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC26.19■■□□□ 1.78
Hdac1O09106 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Hdac1O09106 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
Hdac1O09106 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC26.19■■□□□ 1.78
Hdac1O09106 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Hdac1O09106 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
Hdac1O09106 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Hdac1O09106 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Hdac1O09106 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
Hdac1O09106 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Hdac1O09106 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC26.18■■□□□ 1.78
Hdac1O09106 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
Hdac1O09106 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Hdac1O09106 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Hdac1O09106 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Hdac1O09106 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Hdac1O09106 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Hdac1O09106 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Hdac1O09106 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Hdac1O09106 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC26.16■■□□□ 1.78
Hdac1O09106 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Hdac1O09106 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
Hdac1O09106 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Hdac1O09106 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC26.15■■□□□ 1.78
Hdac1O09106 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC26.15■■□□□ 1.78
Hdac1O09106 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Hdac1O09106 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Hdac1O09106 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
Hdac1O09106 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Hdac1O09106 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.78
Hdac1O09106 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Hdac1O09106 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Hdac1O09106 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Hdac1O09106 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC26.12■■□□□ 1.77
Hdac1O09106 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC26.12■■□□□ 1.77
Hdac1O09106 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Hdac1O09106 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC26.12■■□□□ 1.77
Hdac1O09106 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC26.12■■□□□ 1.77
Hdac1O09106 AC117245.4-201ENSMUST00000217388 1646 ntBASIC26.12■■□□□ 1.77
Hdac1O09106 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
Hdac1O09106 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
Hdac1O09106 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Hdac1O09106 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Hdac1O09106 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC26.11■■□□□ 1.77
Hdac1O09106 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
Hdac1O09106 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Hdac1O09106 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
Hdac1O09106 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Hdac1O09106 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Hdac1O09106 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Hdac1O09106 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Hdac1O09106 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms