Protein–RNA interactions for Protein: O08852

Pkd1, Polycystin-1, mousemouse

Predictions only

Length 4,293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1O08852 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.11
Pkd1O08852 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pkd1O08852 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pkd1O08852 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC14.39□□□□□ -0.11
Pkd1O08852 Gm7417-201ENSMUST00000192950 473 ntBASIC14.39□□□□□ -0.11
Pkd1O08852 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Pkd1O08852 Appbp2os-202ENSMUST00000206972 447 ntBASIC14.38□□□□□ -0.11
Pkd1O08852 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pkd1O08852 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pkd1O08852 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pkd1O08852 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pkd1O08852 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC14.38□□□□□ -0.11
Pkd1O08852 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC14.38□□□□□ -0.11
Pkd1O08852 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pkd1O08852 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pkd1O08852 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pkd1O08852 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pkd1O08852 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pkd1O08852 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC14.37□□□□□ -0.11
Pkd1O08852 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pkd1O08852 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pkd1O08852 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pkd1O08852 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC14.37□□□□□ -0.11
Pkd1O08852 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC14.37□□□□□ -0.11
Pkd1O08852 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Pkd1O08852 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pkd1O08852 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pkd1O08852 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Pkd1O08852 Gm29257-201ENSMUST00000186115 639 ntBASIC14.36□□□□□ -0.11
Pkd1O08852 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC14.36□□□□□ -0.11
Pkd1O08852 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pkd1O08852 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC14.36□□□□□ -0.11
Pkd1O08852 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pkd1O08852 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pkd1O08852 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pkd1O08852 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pkd1O08852 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pkd1O08852 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pkd1O08852 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pkd1O08852 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC14.35□□□□□ -0.11
Pkd1O08852 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pkd1O08852 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pkd1O08852 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Pkd1O08852 Gm7199-201ENSMUST00000118327 1485 ntBASIC14.35□□□□□ -0.11
Pkd1O08852 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pkd1O08852 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Pkd1O08852 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pkd1O08852 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Pkd1O08852 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC14.34□□□□□ -0.11
Pkd1O08852 Gm12821-201ENSMUST00000120022 600 ntBASIC14.33□□□□□ -0.11
Pkd1O08852 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pkd1O08852 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC14.33□□□□□ -0.12
Pkd1O08852 Gm8495-201ENSMUST00000188740 694 ntBASIC14.33□□□□□ -0.12
Pkd1O08852 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pkd1O08852 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC14.33□□□□□ -0.12
Pkd1O08852 Gm27454-201ENSMUST00000185090 204 ntBASIC14.32□□□□□ -0.12
Pkd1O08852 Flvcr1-202ENSMUST00000191946 1216 ntBASIC14.32□□□□□ -0.12
Pkd1O08852 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pkd1O08852 Gm40881-201ENSMUST00000223397 166 ntBASIC14.32□□□□□ -0.12
Pkd1O08852 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pkd1O08852 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC14.32□□□□□ -0.12
Pkd1O08852 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pkd1O08852 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pkd1O08852 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Pkd1O08852 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pkd1O08852 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pkd1O08852 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pkd1O08852 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC14.3□□□□□ -0.12
Pkd1O08852 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pkd1O08852 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pkd1O08852 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Pkd1O08852 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
Pkd1O08852 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Pkd1O08852 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pkd1O08852 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pkd1O08852 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Pkd1O08852 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Pkd1O08852 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pkd1O08852 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pkd1O08852 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Pkd1O08852 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pkd1O08852 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pkd1O08852 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Pkd1O08852 Gm45417-201ENSMUST00000209533 758 ntBASIC14.27□□□□□ -0.12
Pkd1O08852 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Pkd1O08852 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC14.27□□□□□ -0.12
Pkd1O08852 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pkd1O08852 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Pkd1O08852 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pkd1O08852 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pkd1O08852 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pkd1O08852 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC14.26□□□□□ -0.13
Pkd1O08852 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pkd1O08852 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC14.26□□□□□ -0.13
Pkd1O08852 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pkd1O08852 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC14.26□□□□□ -0.13
Pkd1O08852 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Pkd1O08852 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pkd1O08852 Gm2011-201ENSMUST00000203124 1263 ntBASIC14.26□□□□□ -0.13
Pkd1O08852 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms