Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Shisa8J3QNX5 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Shisa8J3QNX5 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Shisa8J3QNX5 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.94■□□□□ 0.78
Shisa8J3QNX5 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Shisa8J3QNX5 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Shisa8J3QNX5 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Shisa8J3QNX5 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
Shisa8J3QNX5 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Shisa8J3QNX5 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Shisa8J3QNX5 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Shisa8J3QNX5 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Shisa8J3QNX5 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Shisa8J3QNX5 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.91■□□□□ 0.78
Shisa8J3QNX5 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Shisa8J3QNX5 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Shisa8J3QNX5 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Shisa8J3QNX5 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Shisa8J3QNX5 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Shisa8J3QNX5 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Shisa8J3QNX5 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Shisa8J3QNX5 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Shisa8J3QNX5 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Shisa8J3QNX5 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Shisa8J3QNX5 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Shisa8J3QNX5 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.9■□□□□ 0.78
Shisa8J3QNX5 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Shisa8J3QNX5 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Shisa8J3QNX5 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Shisa8J3QNX5 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.89■□□□□ 0.77
Shisa8J3QNX5 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Shisa8J3QNX5 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Shisa8J3QNX5 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Shisa8J3QNX5 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Shisa8J3QNX5 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Shisa8J3QNX5 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Shisa8J3QNX5 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Shisa8J3QNX5 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.87■□□□□ 0.77
Shisa8J3QNX5 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Shisa8J3QNX5 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Shisa8J3QNX5 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Shisa8J3QNX5 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Shisa8J3QNX5 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Shisa8J3QNX5 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
Shisa8J3QNX5 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Shisa8J3QNX5 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.86■□□□□ 0.77
Shisa8J3QNX5 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Shisa8J3QNX5 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.85■□□□□ 0.77
Shisa8J3QNX5 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.85■□□□□ 0.77
Shisa8J3QNX5 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Shisa8J3QNX5 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
Shisa8J3QNX5 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Shisa8J3QNX5 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Shisa8J3QNX5 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
Shisa8J3QNX5 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Shisa8J3QNX5 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.83■□□□□ 0.77
Shisa8J3QNX5 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Shisa8J3QNX5 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Shisa8J3QNX5 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Shisa8J3QNX5 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Shisa8J3QNX5 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Shisa8J3QNX5 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.82■□□□□ 0.76
Shisa8J3QNX5 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Shisa8J3QNX5 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Shisa8J3QNX5 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.82■□□□□ 0.76
Shisa8J3QNX5 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Shisa8J3QNX5 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Shisa8J3QNX5 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Shisa8J3QNX5 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Shisa8J3QNX5 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.81■□□□□ 0.76
Shisa8J3QNX5 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Shisa8J3QNX5 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Shisa8J3QNX5 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Shisa8J3QNX5 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Shisa8J3QNX5 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Shisa8J3QNX5 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Shisa8J3QNX5 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Shisa8J3QNX5 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Shisa8J3QNX5 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Shisa8J3QNX5 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Shisa8J3QNX5 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Shisa8J3QNX5 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shisa8J3QNX5 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shisa8J3QNX5 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shisa8J3QNX5 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Shisa8J3QNX5 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Shisa8J3QNX5 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Shisa8J3QNX5 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shisa8J3QNX5 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shisa8J3QNX5 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shisa8J3QNX5 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shisa8J3QNX5 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Shisa8J3QNX5 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shisa8J3QNX5 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Shisa8J3QNX5 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shisa8J3QNX5 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shisa8J3QNX5 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Shisa8J3QNX5 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Shisa8J3QNX5 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Shisa8J3QNX5 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms