Protein–RNA interactions for Protein: E9Q8I6

Vmn1r55, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r55E9Q8I6 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Vmn1r55E9Q8I6 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Vmn1r55E9Q8I6 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Vmn1r55E9Q8I6 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Vmn1r55E9Q8I6 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC22.22■■□□□ 1.15
Vmn1r55E9Q8I6 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Vmn1r55E9Q8I6 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Vmn1r55E9Q8I6 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Vmn1r55E9Q8I6 Gm10232-201ENSMUST00000089221 720 ntBASIC22.22■■□□□ 1.15
Vmn1r55E9Q8I6 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Vmn1r55E9Q8I6 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC22.22■■□□□ 1.15
Vmn1r55E9Q8I6 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC22.21■■□□□ 1.15
Vmn1r55E9Q8I6 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Vmn1r55E9Q8I6 AC153524.1-201ENSMUST00000220436 1935 ntBASIC22.21■■□□□ 1.15
Vmn1r55E9Q8I6 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Vmn1r55E9Q8I6 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC22.2■■□□□ 1.14
Vmn1r55E9Q8I6 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC22.2■■□□□ 1.14
Vmn1r55E9Q8I6 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Vmn1r55E9Q8I6 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Vmn1r55E9Q8I6 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Vmn1r55E9Q8I6 Gm42699-201ENSMUST00000198104 1657 ntBASIC22.2■■□□□ 1.14
Vmn1r55E9Q8I6 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC22.19■■□□□ 1.14
Vmn1r55E9Q8I6 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Vmn1r55E9Q8I6 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Vmn1r55E9Q8I6 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
Vmn1r55E9Q8I6 Gm14117-201ENSMUST00000122417 843 ntBASIC22.18■■□□□ 1.14
Vmn1r55E9Q8I6 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Vmn1r55E9Q8I6 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Vmn1r55E9Q8I6 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC22.18■■□□□ 1.14
Vmn1r55E9Q8I6 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Vmn1r55E9Q8I6 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
Vmn1r55E9Q8I6 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Vmn1r55E9Q8I6 Gm9959-201ENSMUST00000068277 390 ntBASIC22.17■■□□□ 1.14
Vmn1r55E9Q8I6 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Vmn1r55E9Q8I6 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Vmn1r55E9Q8I6 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Vmn1r55E9Q8I6 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Vmn1r55E9Q8I6 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Vmn1r55E9Q8I6 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Vmn1r55E9Q8I6 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Vmn1r55E9Q8I6 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Vmn1r55E9Q8I6 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Vmn1r55E9Q8I6 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
Vmn1r55E9Q8I6 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Vmn1r55E9Q8I6 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Vmn1r55E9Q8I6 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Vmn1r55E9Q8I6 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC22.15■■□□□ 1.14
Vmn1r55E9Q8I6 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Vmn1r55E9Q8I6 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC22.14■■□□□ 1.14
Vmn1r55E9Q8I6 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Vmn1r55E9Q8I6 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC22.14■■□□□ 1.13
Vmn1r55E9Q8I6 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
Vmn1r55E9Q8I6 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
Vmn1r55E9Q8I6 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Vmn1r55E9Q8I6 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
Vmn1r55E9Q8I6 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Vmn1r55E9Q8I6 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Vmn1r55E9Q8I6 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Vmn1r55E9Q8I6 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Vmn1r55E9Q8I6 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Vmn1r55E9Q8I6 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Vmn1r55E9Q8I6 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC22.12■■□□□ 1.13
Vmn1r55E9Q8I6 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Vmn1r55E9Q8I6 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Vmn1r55E9Q8I6 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Vmn1r55E9Q8I6 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Vmn1r55E9Q8I6 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Vmn1r55E9Q8I6 Gm16464-201ENSMUST00000117815 1095 ntBASIC22.1■■□□□ 1.13
Vmn1r55E9Q8I6 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Vmn1r55E9Q8I6 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Vmn1r55E9Q8I6 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Vmn1r55E9Q8I6 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Vmn1r55E9Q8I6 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC22.09■■□□□ 1.13
Vmn1r55E9Q8I6 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Vmn1r55E9Q8I6 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Vmn1r55E9Q8I6 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Vmn1r55E9Q8I6 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Vmn1r55E9Q8I6 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC22.08■■□□□ 1.13
Vmn1r55E9Q8I6 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Vmn1r55E9Q8I6 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Vmn1r55E9Q8I6 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
Vmn1r55E9Q8I6 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Vmn1r55E9Q8I6 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC22.07■■□□□ 1.12
Vmn1r55E9Q8I6 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
Vmn1r55E9Q8I6 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Vmn1r55E9Q8I6 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
Vmn1r55E9Q8I6 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Vmn1r55E9Q8I6 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Vmn1r55E9Q8I6 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Vmn1r55E9Q8I6 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Vmn1r55E9Q8I6 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22.06■■□□□ 1.12
Vmn1r55E9Q8I6 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Vmn1r55E9Q8I6 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC22.06■■□□□ 1.12
Vmn1r55E9Q8I6 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC22.06■■□□□ 1.12
Vmn1r55E9Q8I6 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC22.05■■□□□ 1.12
Vmn1r55E9Q8I6 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Vmn1r55E9Q8I6 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC22.05■■□□□ 1.12
Vmn1r55E9Q8I6 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Vmn1r55E9Q8I6 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC22.05■■□□□ 1.12
Vmn1r55E9Q8I6 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms