Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Cpsf4lE9Q2N0 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cpsf4lE9Q2N0 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cpsf4lE9Q2N0 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cpsf4lE9Q2N0 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cpsf4lE9Q2N0 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cpsf4lE9Q2N0 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cpsf4lE9Q2N0 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cpsf4lE9Q2N0 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cpsf4lE9Q2N0 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cpsf4lE9Q2N0 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cpsf4lE9Q2N0 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC18.62■□□□□ 0.57
Cpsf4lE9Q2N0 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cpsf4lE9Q2N0 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cpsf4lE9Q2N0 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cpsf4lE9Q2N0 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cpsf4lE9Q2N0 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Cpsf4lE9Q2N0 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC18.6■□□□□ 0.57
Cpsf4lE9Q2N0 AC117245.4-201ENSMUST00000217388 1646 ntBASIC18.6■□□□□ 0.57
Cpsf4lE9Q2N0 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cpsf4lE9Q2N0 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cpsf4lE9Q2N0 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cpsf4lE9Q2N0 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cpsf4lE9Q2N0 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cpsf4lE9Q2N0 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cpsf4lE9Q2N0 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cpsf4lE9Q2N0 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Cpsf4lE9Q2N0 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cpsf4lE9Q2N0 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cpsf4lE9Q2N0 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.59■□□□□ 0.57
Cpsf4lE9Q2N0 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.58■□□□□ 0.57
Cpsf4lE9Q2N0 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cpsf4lE9Q2N0 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cpsf4lE9Q2N0 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cpsf4lE9Q2N0 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cpsf4lE9Q2N0 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.58■□□□□ 0.56
Cpsf4lE9Q2N0 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cpsf4lE9Q2N0 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cpsf4lE9Q2N0 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cpsf4lE9Q2N0 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cpsf4lE9Q2N0 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cpsf4lE9Q2N0 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cpsf4lE9Q2N0 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
Cpsf4lE9Q2N0 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC18.57■□□□□ 0.56
Cpsf4lE9Q2N0 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cpsf4lE9Q2N0 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cpsf4lE9Q2N0 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cpsf4lE9Q2N0 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cpsf4lE9Q2N0 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cpsf4lE9Q2N0 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cpsf4lE9Q2N0 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cpsf4lE9Q2N0 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cpsf4lE9Q2N0 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cpsf4lE9Q2N0 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Cpsf4lE9Q2N0 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Cpsf4lE9Q2N0 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cpsf4lE9Q2N0 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cpsf4lE9Q2N0 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cpsf4lE9Q2N0 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cpsf4lE9Q2N0 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Cpsf4lE9Q2N0 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.55■□□□□ 0.56
Cpsf4lE9Q2N0 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Cpsf4lE9Q2N0 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cpsf4lE9Q2N0 Gm10420-201ENSMUST00000121713 882 ntBASIC18.54■□□□□ 0.56
Cpsf4lE9Q2N0 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cpsf4lE9Q2N0 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Cpsf4lE9Q2N0 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Cpsf4lE9Q2N0 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cpsf4lE9Q2N0 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Cpsf4lE9Q2N0 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Cpsf4lE9Q2N0 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Cpsf4lE9Q2N0 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.53■□□□□ 0.56
Cpsf4lE9Q2N0 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cpsf4lE9Q2N0 Gm22567-201ENSMUST00000175542 342 ntBASIC18.53■□□□□ 0.56
Cpsf4lE9Q2N0 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18.53■□□□□ 0.56
Cpsf4lE9Q2N0 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Cpsf4lE9Q2N0 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cpsf4lE9Q2N0 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cpsf4lE9Q2N0 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cpsf4lE9Q2N0 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
Cpsf4lE9Q2N0 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cpsf4lE9Q2N0 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cpsf4lE9Q2N0 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cpsf4lE9Q2N0 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cpsf4lE9Q2N0 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cpsf4lE9Q2N0 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cpsf4lE9Q2N0 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cpsf4lE9Q2N0 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cpsf4lE9Q2N0 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cpsf4lE9Q2N0 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Cpsf4lE9Q2N0 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cpsf4lE9Q2N0 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cpsf4lE9Q2N0 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.5■□□□□ 0.55
Cpsf4lE9Q2N0 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cpsf4lE9Q2N0 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.5■□□□□ 0.55
Cpsf4lE9Q2N0 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cpsf4lE9Q2N0 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cpsf4lE9Q2N0 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Cpsf4lE9Q2N0 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cpsf4lE9Q2N0 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms