Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Herc1E9PZP8 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Herc1E9PZP8 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC13.04□□□□□ -0.32
Herc1E9PZP8 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC13.04□□□□□ -0.32
Herc1E9PZP8 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Herc1E9PZP8 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC13.04□□□□□ -0.32
Herc1E9PZP8 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Herc1E9PZP8 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC13.04□□□□□ -0.32
Herc1E9PZP8 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Herc1E9PZP8 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Herc1E9PZP8 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Herc1E9PZP8 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Herc1E9PZP8 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Herc1E9PZP8 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Herc1E9PZP8 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC13.03□□□□□ -0.32
Herc1E9PZP8 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Herc1E9PZP8 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Herc1E9PZP8 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Herc1E9PZP8 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Herc1E9PZP8 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Herc1E9PZP8 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Herc1E9PZP8 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Herc1E9PZP8 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Herc1E9PZP8 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Herc1E9PZP8 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Herc1E9PZP8 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Herc1E9PZP8 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC13.02□□□□□ -0.33
Herc1E9PZP8 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Herc1E9PZP8 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Herc1E9PZP8 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Herc1E9PZP8 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Herc1E9PZP8 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Herc1E9PZP8 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Herc1E9PZP8 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC13.01□□□□□ -0.33
Herc1E9PZP8 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC13.01□□□□□ -0.33
Herc1E9PZP8 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC13.01□□□□□ -0.33
Herc1E9PZP8 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC13.01□□□□□ -0.33
Herc1E9PZP8 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC13.01□□□□□ -0.33
Herc1E9PZP8 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC13.01□□□□□ -0.33
Herc1E9PZP8 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Herc1E9PZP8 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC13□□□□□ -0.33
Herc1E9PZP8 Gm40881-201ENSMUST00000223397 166 ntBASIC13□□□□□ -0.33
Herc1E9PZP8 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC13□□□□□ -0.33
Herc1E9PZP8 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Herc1E9PZP8 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC13□□□□□ -0.33
Herc1E9PZP8 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC13□□□□□ -0.33
Herc1E9PZP8 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Herc1E9PZP8 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Herc1E9PZP8 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC13□□□□□ -0.33
Herc1E9PZP8 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC12.99□□□□□ -0.33
Herc1E9PZP8 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Herc1E9PZP8 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC12.99□□□□□ -0.33
Herc1E9PZP8 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Herc1E9PZP8 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC12.99□□□□□ -0.33
Herc1E9PZP8 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Herc1E9PZP8 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC12.99□□□□□ -0.33
Herc1E9PZP8 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC12.99□□□□□ -0.33
Herc1E9PZP8 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Herc1E9PZP8 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC12.98□□□□□ -0.33
Herc1E9PZP8 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Herc1E9PZP8 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Herc1E9PZP8 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Herc1E9PZP8 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Herc1E9PZP8 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC12.98□□□□□ -0.33
Herc1E9PZP8 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC12.98□□□□□ -0.33
Herc1E9PZP8 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Herc1E9PZP8 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Herc1E9PZP8 Gm14121-201ENSMUST00000121441 1380 ntBASIC12.98□□□□□ -0.33
Herc1E9PZP8 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Herc1E9PZP8 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Herc1E9PZP8 AC158538.1-201ENSMUST00000225870 294 ntBASIC12.97□□□□□ -0.33
Herc1E9PZP8 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Herc1E9PZP8 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Herc1E9PZP8 Gm42569-201ENSMUST00000200539 472 ntBASIC12.97□□□□□ -0.33
Herc1E9PZP8 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Herc1E9PZP8 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Herc1E9PZP8 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Herc1E9PZP8 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC12.97□□□□□ -0.33
Herc1E9PZP8 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC12.97□□□□□ -0.33
Herc1E9PZP8 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Herc1E9PZP8 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Herc1E9PZP8 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC12.96□□□□□ -0.33
Herc1E9PZP8 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Herc1E9PZP8 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC12.96□□□□□ -0.33
Herc1E9PZP8 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Herc1E9PZP8 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC12.96□□□□□ -0.34
Herc1E9PZP8 Gm2415-204ENSMUST00000190235 2004 ntBASIC12.96□□□□□ -0.34
Herc1E9PZP8 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Herc1E9PZP8 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Herc1E9PZP8 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Herc1E9PZP8 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Herc1E9PZP8 Gm10252-201ENSMUST00000209541 832 ntBASIC12.95□□□□□ -0.34
Herc1E9PZP8 AC130671.1-201ENSMUST00000227384 1237 ntBASIC12.95□□□□□ -0.34
Herc1E9PZP8 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Herc1E9PZP8 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC12.94□□□□□ -0.34
Herc1E9PZP8 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Herc1E9PZP8 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Herc1E9PZP8 Gm7977-201ENSMUST00000193787 748 ntBASIC12.94□□□□□ -0.34
Herc1E9PZP8 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Herc1E9PZP8 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms