Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Herc1E9PZP8 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Herc1E9PZP8 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC13.04□□□□□ -0.32
Herc1E9PZP8 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC13.04□□□□□ -0.32
Herc1E9PZP8 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Herc1E9PZP8 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC13.04□□□□□ -0.32
Herc1E9PZP8 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Herc1E9PZP8 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC13.04□□□□□ -0.32
Herc1E9PZP8 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Herc1E9PZP8 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Herc1E9PZP8 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Herc1E9PZP8 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Herc1E9PZP8 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Herc1E9PZP8 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Herc1E9PZP8 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC13.03□□□□□ -0.32
Herc1E9PZP8 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Herc1E9PZP8 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Herc1E9PZP8 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Herc1E9PZP8 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Herc1E9PZP8 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Herc1E9PZP8 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Herc1E9PZP8 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Herc1E9PZP8 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Herc1E9PZP8 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Herc1E9PZP8 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Herc1E9PZP8 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Herc1E9PZP8 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC13.02□□□□□ -0.33
Herc1E9PZP8 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Herc1E9PZP8 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Herc1E9PZP8 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Herc1E9PZP8 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Herc1E9PZP8 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Herc1E9PZP8 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Herc1E9PZP8 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC13.01□□□□□ -0.33
Herc1E9PZP8 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC13.01□□□□□ -0.33
Herc1E9PZP8 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC13.01□□□□□ -0.33
Herc1E9PZP8 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC13.01□□□□□ -0.33
Herc1E9PZP8 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC13.01□□□□□ -0.33
Herc1E9PZP8 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC13.01□□□□□ -0.33
Herc1E9PZP8 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Herc1E9PZP8 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC13□□□□□ -0.33
Herc1E9PZP8 Gm40881-201ENSMUST00000223397 166 ntBASIC13□□□□□ -0.33
Herc1E9PZP8 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC13□□□□□ -0.33
Herc1E9PZP8 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Herc1E9PZP8 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC13□□□□□ -0.33
Herc1E9PZP8 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC13□□□□□ -0.33
Herc1E9PZP8 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Herc1E9PZP8 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Herc1E9PZP8 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC13□□□□□ -0.33
Herc1E9PZP8 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC12.99□□□□□ -0.33
Herc1E9PZP8 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Herc1E9PZP8 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC12.99□□□□□ -0.33
Herc1E9PZP8 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Herc1E9PZP8 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC12.99□□□□□ -0.33
Herc1E9PZP8 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Herc1E9PZP8 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC12.99□□□□□ -0.33
Herc1E9PZP8 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC12.99□□□□□ -0.33
Herc1E9PZP8 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Herc1E9PZP8 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC12.98□□□□□ -0.33
Herc1E9PZP8 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Herc1E9PZP8 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Herc1E9PZP8 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Herc1E9PZP8 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Herc1E9PZP8 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC12.98□□□□□ -0.33
Herc1E9PZP8 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC12.98□□□□□ -0.33
Herc1E9PZP8 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Herc1E9PZP8 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Herc1E9PZP8 Gm14121-201ENSMUST00000121441 1380 ntBASIC12.98□□□□□ -0.33
Herc1E9PZP8 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Herc1E9PZP8 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Herc1E9PZP8 AC158538.1-201ENSMUST00000225870 294 ntBASIC12.97□□□□□ -0.33
Herc1E9PZP8 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Herc1E9PZP8 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Herc1E9PZP8 Gm42569-201ENSMUST00000200539 472 ntBASIC12.97□□□□□ -0.33
Herc1E9PZP8 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Herc1E9PZP8 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Herc1E9PZP8 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Herc1E9PZP8 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC12.97□□□□□ -0.33
Herc1E9PZP8 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC12.97□□□□□ -0.33
Herc1E9PZP8 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Herc1E9PZP8 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Herc1E9PZP8 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC12.96□□□□□ -0.33
Herc1E9PZP8 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Herc1E9PZP8 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC12.96□□□□□ -0.33
Herc1E9PZP8 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Herc1E9PZP8 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC12.96□□□□□ -0.34
Herc1E9PZP8 Gm2415-204ENSMUST00000190235 2004 ntBASIC12.96□□□□□ -0.34
Herc1E9PZP8 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Herc1E9PZP8 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Herc1E9PZP8 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Herc1E9PZP8 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Herc1E9PZP8 Gm10252-201ENSMUST00000209541 832 ntBASIC12.95□□□□□ -0.34
Herc1E9PZP8 AC130671.1-201ENSMUST00000227384 1237 ntBASIC12.95□□□□□ -0.34
Herc1E9PZP8 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Herc1E9PZP8 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC12.94□□□□□ -0.34
Herc1E9PZP8 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Herc1E9PZP8 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Herc1E9PZP8 Gm7977-201ENSMUST00000193787 748 ntBASIC12.94□□□□□ -0.34
Herc1E9PZP8 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Herc1E9PZP8 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms