Protein–RNA interactions for Protein: D3YXG0

Hmcn1, Hemicentin-1, mousemouse

Predictions only

Length 5,634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmcn1D3YXG0 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC6.67□□□□□ -1.34
Hmcn1D3YXG0 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Hmcn1D3YXG0 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Hmcn1D3YXG0 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Hmcn1D3YXG0 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Hmcn1D3YXG0 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC6.67□□□□□ -1.34
Hmcn1D3YXG0 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC6.67□□□□□ -1.34
Hmcn1D3YXG0 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC6.67□□□□□ -1.34
Hmcn1D3YXG0 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC6.66□□□□□ -1.34
Hmcn1D3YXG0 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Hmcn1D3YXG0 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC6.66□□□□□ -1.34
Hmcn1D3YXG0 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC6.66□□□□□ -1.34
Hmcn1D3YXG0 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC6.66□□□□□ -1.34
Hmcn1D3YXG0 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC6.66□□□□□ -1.34
Hmcn1D3YXG0 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC6.66□□□□□ -1.34
Hmcn1D3YXG0 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Hmcn1D3YXG0 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Hmcn1D3YXG0 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
Hmcn1D3YXG0 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
Hmcn1D3YXG0 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Hmcn1D3YXG0 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Hmcn1D3YXG0 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Hmcn1D3YXG0 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
Hmcn1D3YXG0 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Hmcn1D3YXG0 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC6.66□□□□□ -1.34
Hmcn1D3YXG0 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC6.66□□□□□ -1.34
Hmcn1D3YXG0 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Hmcn1D3YXG0 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Hmcn1D3YXG0 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC6.65□□□□□ -1.34
Hmcn1D3YXG0 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Hmcn1D3YXG0 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Hmcn1D3YXG0 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC6.65□□□□□ -1.34
Hmcn1D3YXG0 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Hmcn1D3YXG0 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
Hmcn1D3YXG0 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
Hmcn1D3YXG0 CT025689.6-201ENSMUST00000224991 1104 ntBASIC6.65□□□□□ -1.34
Hmcn1D3YXG0 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
Hmcn1D3YXG0 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
Hmcn1D3YXG0 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Hmcn1D3YXG0 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC6.65□□□□□ -1.35
Hmcn1D3YXG0 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Hmcn1D3YXG0 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Hmcn1D3YXG0 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Hmcn1D3YXG0 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Hmcn1D3YXG0 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Hmcn1D3YXG0 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC6.65□□□□□ -1.35
Hmcn1D3YXG0 Gm26571-201ENSMUST00000181399 666 ntBASIC6.65□□□□□ -1.35
Hmcn1D3YXG0 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Hmcn1D3YXG0 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
Hmcn1D3YXG0 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Hmcn1D3YXG0 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Hmcn1D3YXG0 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC6.64□□□□□ -1.35
Hmcn1D3YXG0 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Hmcn1D3YXG0 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Hmcn1D3YXG0 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC6.64□□□□□ -1.35
Hmcn1D3YXG0 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC6.64□□□□□ -1.35
Hmcn1D3YXG0 Gm27405-201ENSMUST00000184201 112 ntBASIC6.64□□□□□ -1.35
Hmcn1D3YXG0 Spcs1-204ENSMUST00000226782 949 ntBASIC6.64□□□□□ -1.35
Hmcn1D3YXG0 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Hmcn1D3YXG0 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Hmcn1D3YXG0 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Hmcn1D3YXG0 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC6.63□□□□□ -1.35
Hmcn1D3YXG0 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Hmcn1D3YXG0 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Hmcn1D3YXG0 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Hmcn1D3YXG0 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Hmcn1D3YXG0 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Hmcn1D3YXG0 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Hmcn1D3YXG0 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC6.63□□□□□ -1.35
Hmcn1D3YXG0 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Hmcn1D3YXG0 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
Hmcn1D3YXG0 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
Hmcn1D3YXG0 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Hmcn1D3YXG0 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Hmcn1D3YXG0 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Hmcn1D3YXG0 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Hmcn1D3YXG0 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC6.63□□□□□ -1.35
Hmcn1D3YXG0 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Hmcn1D3YXG0 Gm27801-201ENSMUST00000184174 223 ntBASIC6.63□□□□□ -1.35
Hmcn1D3YXG0 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC6.63□□□□□ -1.35
Hmcn1D3YXG0 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Hmcn1D3YXG0 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC6.62□□□□□ -1.35
Hmcn1D3YXG0 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Hmcn1D3YXG0 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Hmcn1D3YXG0 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Hmcn1D3YXG0 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Hmcn1D3YXG0 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Hmcn1D3YXG0 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC6.62□□□□□ -1.35
Hmcn1D3YXG0 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Hmcn1D3YXG0 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Hmcn1D3YXG0 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Hmcn1D3YXG0 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC6.61□□□□□ -1.35
Hmcn1D3YXG0 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC6.61□□□□□ -1.35
Hmcn1D3YXG0 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Hmcn1D3YXG0 Gm26833-201ENSMUST00000180899 440 ntBASIC6.61□□□□□ -1.35
Hmcn1D3YXG0 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC6.61□□□□□ -1.35
Hmcn1D3YXG0 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Hmcn1D3YXG0 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Hmcn1D3YXG0 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC6.61□□□□□ -1.35
Hmcn1D3YXG0 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms