Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Gm12887B1AVM1 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gm12887B1AVM1 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Gm12887B1AVM1 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Gm12887B1AVM1 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm12887B1AVM1 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Gm12887B1AVM1 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Gm12887B1AVM1 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm12887B1AVM1 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Gm12887B1AVM1 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm12887B1AVM1 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm12887B1AVM1 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm12887B1AVM1 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm12887B1AVM1 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm12887B1AVM1 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm12887B1AVM1 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm12887B1AVM1 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm12887B1AVM1 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm12887B1AVM1 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm12887B1AVM1 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm12887B1AVM1 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm12887B1AVM1 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Gm12887B1AVM1 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Gm12887B1AVM1 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm12887B1AVM1 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Gm12887B1AVM1 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Gm12887B1AVM1 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC17.71■□□□□ 0.42
Gm12887B1AVM1 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Gm12887B1AVM1 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm12887B1AVM1 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm12887B1AVM1 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm12887B1AVM1 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
Gm12887B1AVM1 Gm37136-201ENSMUST00000194368 194 ntBASIC17.7■□□□□ 0.42
Gm12887B1AVM1 AC153962.1-201ENSMUST00000218530 1948 ntBASIC17.7■□□□□ 0.42
Gm12887B1AVM1 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Gm12887B1AVM1 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm12887B1AVM1 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Gm12887B1AVM1 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm12887B1AVM1 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm12887B1AVM1 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm12887B1AVM1 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm12887B1AVM1 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm12887B1AVM1 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm12887B1AVM1 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm12887B1AVM1 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm12887B1AVM1 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm12887B1AVM1 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm12887B1AVM1 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm12887B1AVM1 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC17.67■□□□□ 0.42
Gm12887B1AVM1 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC17.67■□□□□ 0.42
Gm12887B1AVM1 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm12887B1AVM1 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
Gm12887B1AVM1 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm12887B1AVM1 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm12887B1AVM1 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm12887B1AVM1 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC17.66■□□□□ 0.42
Gm12887B1AVM1 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Gm12887B1AVM1 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm12887B1AVM1 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm12887B1AVM1 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm12887B1AVM1 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
Gm12887B1AVM1 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Gm12887B1AVM1 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Gm12887B1AVM1 Gm9910-201ENSMUST00000195385 1550 ntBASIC17.65■□□□□ 0.42
Gm12887B1AVM1 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm12887B1AVM1 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm12887B1AVM1 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Gm12887B1AVM1 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC17.64■□□□□ 0.41
Gm12887B1AVM1 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Gm12887B1AVM1 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm12887B1AVM1 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm12887B1AVM1 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Gm12887B1AVM1 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Gm12887B1AVM1 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm12887B1AVM1 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm12887B1AVM1 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm12887B1AVM1 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm12887B1AVM1 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm12887B1AVM1 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.63■□□□□ 0.41
Gm12887B1AVM1 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Gm12887B1AVM1 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm12887B1AVM1 Tdp2-203ENSMUST00000223804 1136 ntBASIC17.63■□□□□ 0.41
Gm12887B1AVM1 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.63■□□□□ 0.41
Gm12887B1AVM1 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Gm12887B1AVM1 AC153524.1-201ENSMUST00000220436 1935 ntBASIC17.62■□□□□ 0.41
Gm12887B1AVM1 Gm28731-201ENSMUST00000185564 1569 ntBASIC17.62■□□□□ 0.41
Gm12887B1AVM1 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Gm12887B1AVM1 Gm45855-201ENSMUST00000212546 880 ntBASIC17.62■□□□□ 0.41
Gm12887B1AVM1 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm12887B1AVM1 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm12887B1AVM1 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm12887B1AVM1 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
Gm12887B1AVM1 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Gm12887B1AVM1 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm12887B1AVM1 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm12887B1AVM1 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm12887B1AVM1 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm12887B1AVM1 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm12887B1AVM1 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Gm12887B1AVM1 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 912.1 ms