Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
Sh2d4bA6X942 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Sh2d4bA6X942 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Sh2d4bA6X942 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Sh2d4bA6X942 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC23.36■■□□□ 1.33
Sh2d4bA6X942 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Sh2d4bA6X942 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Sh2d4bA6X942 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Sh2d4bA6X942 AC117769.4-201ENSMUST00000225679 685 ntBASIC23.35■■□□□ 1.33
Sh2d4bA6X942 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Sh2d4bA6X942 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Sh2d4bA6X942 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Sh2d4bA6X942 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Sh2d4bA6X942 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Sh2d4bA6X942 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Sh2d4bA6X942 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Sh2d4bA6X942 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
Sh2d4bA6X942 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
Sh2d4bA6X942 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Sh2d4bA6X942 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Sh2d4bA6X942 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Sh2d4bA6X942 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Sh2d4bA6X942 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Sh2d4bA6X942 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
Sh2d4bA6X942 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC23.32■■□□□ 1.32
Sh2d4bA6X942 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Sh2d4bA6X942 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC23.31■■□□□ 1.32
Sh2d4bA6X942 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Sh2d4bA6X942 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC23.3■■□□□ 1.32
Sh2d4bA6X942 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Sh2d4bA6X942 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC23.3■■□□□ 1.32
Sh2d4bA6X942 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC23.29■■□□□ 1.32
Sh2d4bA6X942 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Sh2d4bA6X942 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Sh2d4bA6X942 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Sh2d4bA6X942 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Sh2d4bA6X942 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC23.28■■□□□ 1.32
Sh2d4bA6X942 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Sh2d4bA6X942 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Sh2d4bA6X942 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
Sh2d4bA6X942 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
Sh2d4bA6X942 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Sh2d4bA6X942 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Sh2d4bA6X942 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
Sh2d4bA6X942 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
Sh2d4bA6X942 Gm4419-202ENSMUST00000226239 1431 ntBASIC23.26■■□□□ 1.31
Sh2d4bA6X942 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Sh2d4bA6X942 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Sh2d4bA6X942 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Sh2d4bA6X942 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Sh2d4bA6X942 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Sh2d4bA6X942 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC23.25■■□□□ 1.31
Sh2d4bA6X942 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Sh2d4bA6X942 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC23.25■■□□□ 1.31
Sh2d4bA6X942 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Sh2d4bA6X942 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC23.25■■□□□ 1.31
Sh2d4bA6X942 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Sh2d4bA6X942 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
Sh2d4bA6X942 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
Sh2d4bA6X942 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Sh2d4bA6X942 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Sh2d4bA6X942 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Sh2d4bA6X942 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Sh2d4bA6X942 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC23.23■■□□□ 1.31
Sh2d4bA6X942 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Sh2d4bA6X942 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
Sh2d4bA6X942 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Sh2d4bA6X942 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
Sh2d4bA6X942 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
Sh2d4bA6X942 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC23.22■■□□□ 1.31
Sh2d4bA6X942 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Sh2d4bA6X942 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
Sh2d4bA6X942 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC23.22■■□□□ 1.31
Sh2d4bA6X942 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Sh2d4bA6X942 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Sh2d4bA6X942 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC23.21■■□□□ 1.31
Sh2d4bA6X942 Etf1-202ENSMUST00000180351 108 ntBASIC23.21■■□□□ 1.31
Sh2d4bA6X942 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC23.21■■□□□ 1.31
Sh2d4bA6X942 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Sh2d4bA6X942 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Sh2d4bA6X942 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Sh2d4bA6X942 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC23.2■■□□□ 1.3
Sh2d4bA6X942 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Sh2d4bA6X942 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
Sh2d4bA6X942 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Sh2d4bA6X942 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Sh2d4bA6X942 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Sh2d4bA6X942 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Sh2d4bA6X942 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Sh2d4bA6X942 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC23.19■■□□□ 1.3
Sh2d4bA6X942 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC23.18■■□□□ 1.3
Sh2d4bA6X942 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
Sh2d4bA6X942 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Sh2d4bA6X942 Gm10232-201ENSMUST00000089221 720 ntBASIC23.18■■□□□ 1.3
Sh2d4bA6X942 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Sh2d4bA6X942 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
Sh2d4bA6X942 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
Sh2d4bA6X942 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Sh2d4bA6X942 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC23.17■■□□□ 1.3
Sh2d4bA6X942 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms