Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smim17A0A504 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.91■□□□□ 0.78
Smim17A0A504 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Smim17A0A504 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Smim17A0A504 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Smim17A0A504 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smim17A0A504 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Smim17A0A504 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Smim17A0A504 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Smim17A0A504 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Smim17A0A504 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Smim17A0A504 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Smim17A0A504 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smim17A0A504 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.88■□□□□ 0.77
Smim17A0A504 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smim17A0A504 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.88■□□□□ 0.77
Smim17A0A504 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smim17A0A504 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Smim17A0A504 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smim17A0A504 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smim17A0A504 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Smim17A0A504 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smim17A0A504 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Smim17A0A504 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smim17A0A504 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smim17A0A504 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.87■□□□□ 0.77
Smim17A0A504 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Smim17A0A504 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.87■□□□□ 0.77
Smim17A0A504 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Smim17A0A504 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smim17A0A504 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smim17A0A504 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smim17A0A504 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.86■□□□□ 0.77
Smim17A0A504 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smim17A0A504 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Smim17A0A504 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
Smim17A0A504 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smim17A0A504 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smim17A0A504 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smim17A0A504 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smim17A0A504 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smim17A0A504 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.85■□□□□ 0.77
Smim17A0A504 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smim17A0A504 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smim17A0A504 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smim17A0A504 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Smim17A0A504 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smim17A0A504 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC19.84■□□□□ 0.77
Smim17A0A504 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Smim17A0A504 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smim17A0A504 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smim17A0A504 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smim17A0A504 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smim17A0A504 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.83■□□□□ 0.77
Smim17A0A504 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Smim17A0A504 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Smim17A0A504 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smim17A0A504 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smim17A0A504 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Smim17A0A504 Gm30023-201ENSMUST00000197970 889 ntBASIC19.82■□□□□ 0.76
Smim17A0A504 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Smim17A0A504 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.82■□□□□ 0.76
Smim17A0A504 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smim17A0A504 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Smim17A0A504 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.81■□□□□ 0.76
Smim17A0A504 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smim17A0A504 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smim17A0A504 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smim17A0A504 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smim17A0A504 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Smim17A0A504 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smim17A0A504 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.78■□□□□ 0.76
Smim17A0A504 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smim17A0A504 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Smim17A0A504 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC19.78■□□□□ 0.76
Smim17A0A504 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
Smim17A0A504 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.78■□□□□ 0.76
Smim17A0A504 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smim17A0A504 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Smim17A0A504 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smim17A0A504 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Smim17A0A504 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smim17A0A504 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Smim17A0A504 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smim17A0A504 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Smim17A0A504 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Smim17A0A504 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smim17A0A504 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smim17A0A504 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Smim17A0A504 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Smim17A0A504 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smim17A0A504 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Smim17A0A504 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smim17A0A504 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smim17A0A504 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smim17A0A504 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.76■□□□□ 0.75
Smim17A0A504 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smim17A0A504 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Smim17A0A504 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smim17A0A504 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 120.7 ms