Protein–RNA interactions for Protein: A0A140T8P4

Igkv3-9, Immunoglobulin kappa variable 3-9 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-9A0A140T8P4 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC15.21■□□□□ 0.03
Igkv3-9A0A140T8P4 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Igkv3-9A0A140T8P4 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Igkv3-9A0A140T8P4 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Igkv3-9A0A140T8P4 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Igkv3-9A0A140T8P4 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Igkv3-9A0A140T8P4 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Igkv3-9A0A140T8P4 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
Igkv3-9A0A140T8P4 AC164433.2-201ENSMUST00000226346 1701 ntBASIC15.2■□□□□ 0.02
Igkv3-9A0A140T8P4 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Igkv3-9A0A140T8P4 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Igkv3-9A0A140T8P4 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Igkv3-9A0A140T8P4 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Igkv3-9A0A140T8P4 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Igkv3-9A0A140T8P4 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
Igkv3-9A0A140T8P4 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Igkv3-9A0A140T8P4 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Igkv3-9A0A140T8P4 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Igkv3-9A0A140T8P4 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Igkv3-9A0A140T8P4 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Igkv3-9A0A140T8P4 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Igkv3-9A0A140T8P4 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Igkv3-9A0A140T8P4 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC15.18■□□□□ 0.02
Igkv3-9A0A140T8P4 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC15.18■□□□□ 0.02
Igkv3-9A0A140T8P4 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Igkv3-9A0A140T8P4 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC15.18■□□□□ 0.02
Igkv3-9A0A140T8P4 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Igkv3-9A0A140T8P4 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Igkv3-9A0A140T8P4 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Igkv3-9A0A140T8P4 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Igkv3-9A0A140T8P4 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC15.17■□□□□ 0.02
Igkv3-9A0A140T8P4 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC15.17■□□□□ 0.02
Igkv3-9A0A140T8P4 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Igkv3-9A0A140T8P4 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Igkv3-9A0A140T8P4 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Igkv3-9A0A140T8P4 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Igkv3-9A0A140T8P4 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Igkv3-9A0A140T8P4 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Igkv3-9A0A140T8P4 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Igkv3-9A0A140T8P4 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Igkv3-9A0A140T8P4 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Igkv3-9A0A140T8P4 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Igkv3-9A0A140T8P4 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Igkv3-9A0A140T8P4 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Igkv3-9A0A140T8P4 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Igkv3-9A0A140T8P4 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Igkv3-9A0A140T8P4 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Igkv3-9A0A140T8P4 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Igkv3-9A0A140T8P4 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Igkv3-9A0A140T8P4 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Igkv3-9A0A140T8P4 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Igkv3-9A0A140T8P4 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Igkv3-9A0A140T8P4 H3f3aos-201ENSMUST00000097448 2905 ntBASIC15.15■□□□□ 0.02
Igkv3-9A0A140T8P4 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Igkv3-9A0A140T8P4 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Igkv3-9A0A140T8P4 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Igkv3-9A0A140T8P4 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Igkv3-9A0A140T8P4 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Igkv3-9A0A140T8P4 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Igkv3-9A0A140T8P4 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Igkv3-9A0A140T8P4 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Igkv3-9A0A140T8P4 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Igkv3-9A0A140T8P4 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Igkv3-9A0A140T8P4 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Igkv3-9A0A140T8P4 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Igkv3-9A0A140T8P4 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Igkv3-9A0A140T8P4 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC15.14■□□□□ 0.01
Igkv3-9A0A140T8P4 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Igkv3-9A0A140T8P4 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Igkv3-9A0A140T8P4 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Igkv3-9A0A140T8P4 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC15.14■□□□□ 0.01
Igkv3-9A0A140T8P4 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Igkv3-9A0A140T8P4 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Igkv3-9A0A140T8P4 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Igkv3-9A0A140T8P4 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Igkv3-9A0A140T8P4 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Igkv3-9A0A140T8P4 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Igkv3-9A0A140T8P4 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC15.13■□□□□ 0.01
Igkv3-9A0A140T8P4 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Igkv3-9A0A140T8P4 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Igkv3-9A0A140T8P4 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC15.13■□□□□ 0.01
Igkv3-9A0A140T8P4 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Igkv3-9A0A140T8P4 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Igkv3-9A0A140T8P4 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Igkv3-9A0A140T8P4 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC15.12■□□□□ 0.01
Igkv3-9A0A140T8P4 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Igkv3-9A0A140T8P4 Gm9910-201ENSMUST00000195385 1550 ntBASIC15.12■□□□□ 0.01
Igkv3-9A0A140T8P4 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Igkv3-9A0A140T8P4 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Igkv3-9A0A140T8P4 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Igkv3-9A0A140T8P4 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Igkv3-9A0A140T8P4 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Igkv3-9A0A140T8P4 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Igkv3-9A0A140T8P4 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Igkv3-9A0A140T8P4 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Igkv3-9A0A140T8P4 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Igkv3-9A0A140T8P4 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Igkv3-9A0A140T8P4 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC15.12■□□□□ 0.01
Igkv3-9A0A140T8P4 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Igkv3-9A0A140T8P4 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms