Protein–RNA interactions for Protein: A0A140T8N6

Trbv13-2, T cell receptor beta, variable 13-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-2A0A140T8N6 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trbv13-2A0A140T8N6 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Trbv13-2A0A140T8N6 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv13-2A0A140T8N6 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC15.2■□□□□ 0.02
Trbv13-2A0A140T8N6 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv13-2A0A140T8N6 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv13-2A0A140T8N6 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv13-2A0A140T8N6 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC15.2■□□□□ 0.02
Trbv13-2A0A140T8N6 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv13-2A0A140T8N6 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trbv13-2A0A140T8N6 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv13-2A0A140T8N6 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv13-2A0A140T8N6 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv13-2A0A140T8N6 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv13-2A0A140T8N6 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv13-2A0A140T8N6 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv13-2A0A140T8N6 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv13-2A0A140T8N6 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv13-2A0A140T8N6 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC15.19■□□□□ 0.02
Trbv13-2A0A140T8N6 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv13-2A0A140T8N6 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv13-2A0A140T8N6 Gm28731-201ENSMUST00000185564 1569 ntBASIC15.19■□□□□ 0.02
Trbv13-2A0A140T8N6 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC15.18■□□□□ 0.02
Trbv13-2A0A140T8N6 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Trbv13-2A0A140T8N6 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv13-2A0A140T8N6 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv13-2A0A140T8N6 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv13-2A0A140T8N6 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv13-2A0A140T8N6 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv13-2A0A140T8N6 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv13-2A0A140T8N6 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv13-2A0A140T8N6 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv13-2A0A140T8N6 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv13-2A0A140T8N6 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv13-2A0A140T8N6 AC153524.1-201ENSMUST00000220436 1935 ntBASIC15.17■□□□□ 0.02
Trbv13-2A0A140T8N6 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Trbv13-2A0A140T8N6 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv13-2A0A140T8N6 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv13-2A0A140T8N6 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC15.16■□□□□ 0.02
Trbv13-2A0A140T8N6 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv13-2A0A140T8N6 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv13-2A0A140T8N6 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv13-2A0A140T8N6 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trbv13-2A0A140T8N6 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv13-2A0A140T8N6 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv13-2A0A140T8N6 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv13-2A0A140T8N6 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv13-2A0A140T8N6 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC15.15■□□□□ 0.02
Trbv13-2A0A140T8N6 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv13-2A0A140T8N6 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trbv13-2A0A140T8N6 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trbv13-2A0A140T8N6 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trbv13-2A0A140T8N6 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Trbv13-2A0A140T8N6 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trbv13-2A0A140T8N6 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trbv13-2A0A140T8N6 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trbv13-2A0A140T8N6 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv13-2A0A140T8N6 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv13-2A0A140T8N6 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Trbv13-2A0A140T8N6 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Trbv13-2A0A140T8N6 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv13-2A0A140T8N6 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv13-2A0A140T8N6 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC15.13■□□□□ 0.01
Trbv13-2A0A140T8N6 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv13-2A0A140T8N6 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv13-2A0A140T8N6 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv13-2A0A140T8N6 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv13-2A0A140T8N6 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Trbv13-2A0A140T8N6 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv13-2A0A140T8N6 Gm14523-201ENSMUST00000117260 558 ntBASIC15.12■□□□□ 0.01
Trbv13-2A0A140T8N6 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv13-2A0A140T8N6 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trbv13-2A0A140T8N6 Gm20634-201ENSMUST00000090779 2956 ntBASIC15.12■□□□□ 0.01
Trbv13-2A0A140T8N6 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC15.12■□□□□ 0.01
Trbv13-2A0A140T8N6 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv13-2A0A140T8N6 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC15.11■□□□□ 0.01
Trbv13-2A0A140T8N6 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv13-2A0A140T8N6 Gm7332-201ENSMUST00000118351 454 ntBASIC15.11■□□□□ 0.01
Trbv13-2A0A140T8N6 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC15.11■□□□□ 0.01
Trbv13-2A0A140T8N6 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv13-2A0A140T8N6 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv13-2A0A140T8N6 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC15.11■□□□□ 0.01
Trbv13-2A0A140T8N6 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv13-2A0A140T8N6 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv13-2A0A140T8N6 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv13-2A0A140T8N6 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC15.1■□□□□ 0.01
Trbv13-2A0A140T8N6 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv13-2A0A140T8N6 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv13-2A0A140T8N6 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv13-2A0A140T8N6 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv13-2A0A140T8N6 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC15.1■□□□□ 0.01
Trbv13-2A0A140T8N6 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv13-2A0A140T8N6 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv13-2A0A140T8N6 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv13-2A0A140T8N6 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv13-2A0A140T8N6 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Trbv13-2A0A140T8N6 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Trbv13-2A0A140T8N6 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trbv13-2A0A140T8N6 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trbv13-2A0A140T8N6 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 105.9 ms