Protein–RNA interactions for Protein: A0A0A6YXA3

Ighv8-6, Immunoglobulin heavy variable V8-6 (Fragment), mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv8-6A0A0A6YXA3 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC16.46■□□□□ 0.23
Ighv8-6A0A0A6YXA3 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Ighv8-6A0A0A6YXA3 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ighv8-6A0A0A6YXA3 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ighv8-6A0A0A6YXA3 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ighv8-6A0A0A6YXA3 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ighv8-6A0A0A6YXA3 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Ighv8-6A0A0A6YXA3 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ighv8-6A0A0A6YXA3 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ighv8-6A0A0A6YXA3 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ighv8-6A0A0A6YXA3 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
Ighv8-6A0A0A6YXA3 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ighv8-6A0A0A6YXA3 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ighv8-6A0A0A6YXA3 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ighv8-6A0A0A6YXA3 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.44■□□□□ 0.22
Ighv8-6A0A0A6YXA3 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ighv8-6A0A0A6YXA3 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ighv8-6A0A0A6YXA3 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC16.44■□□□□ 0.22
Ighv8-6A0A0A6YXA3 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv8-6A0A0A6YXA3 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv8-6A0A0A6YXA3 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv8-6A0A0A6YXA3 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Ighv8-6A0A0A6YXA3 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv8-6A0A0A6YXA3 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Ighv8-6A0A0A6YXA3 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv8-6A0A0A6YXA3 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Ighv8-6A0A0A6YXA3 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Ighv8-6A0A0A6YXA3 Gm32051-202ENSMUST00000197905 2385 ntBASIC16.42■□□□□ 0.22
Ighv8-6A0A0A6YXA3 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Ighv8-6A0A0A6YXA3 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv8-6A0A0A6YXA3 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC16.41■□□□□ 0.22
Ighv8-6A0A0A6YXA3 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv8-6A0A0A6YXA3 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv8-6A0A0A6YXA3 Gm4419-202ENSMUST00000226239 1431 ntBASIC16.41■□□□□ 0.22
Ighv8-6A0A0A6YXA3 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv8-6A0A0A6YXA3 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv8-6A0A0A6YXA3 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv8-6A0A0A6YXA3 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ighv8-6A0A0A6YXA3 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Ighv8-6A0A0A6YXA3 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv8-6A0A0A6YXA3 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC16.4■□□□□ 0.22
Ighv8-6A0A0A6YXA3 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv8-6A0A0A6YXA3 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ighv8-6A0A0A6YXA3 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ighv8-6A0A0A6YXA3 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ighv8-6A0A0A6YXA3 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC16.39■□□□□ 0.21
Ighv8-6A0A0A6YXA3 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ighv8-6A0A0A6YXA3 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Ighv8-6A0A0A6YXA3 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Ighv8-6A0A0A6YXA3 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv8-6A0A0A6YXA3 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv8-6A0A0A6YXA3 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv8-6A0A0A6YXA3 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ighv8-6A0A0A6YXA3 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv8-6A0A0A6YXA3 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC16.37■□□□□ 0.21
Ighv8-6A0A0A6YXA3 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv8-6A0A0A6YXA3 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv8-6A0A0A6YXA3 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Ighv8-6A0A0A6YXA3 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv8-6A0A0A6YXA3 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ighv8-6A0A0A6YXA3 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv8-6A0A0A6YXA3 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv8-6A0A0A6YXA3 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv8-6A0A0A6YXA3 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv8-6A0A0A6YXA3 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv8-6A0A0A6YXA3 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv8-6A0A0A6YXA3 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Ighv8-6A0A0A6YXA3 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ighv8-6A0A0A6YXA3 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ighv8-6A0A0A6YXA3 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ighv8-6A0A0A6YXA3 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ighv8-6A0A0A6YXA3 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ighv8-6A0A0A6YXA3 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Ighv8-6A0A0A6YXA3 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ighv8-6A0A0A6YXA3 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ighv8-6A0A0A6YXA3 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Ighv8-6A0A0A6YXA3 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ighv8-6A0A0A6YXA3 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ighv8-6A0A0A6YXA3 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ighv8-6A0A0A6YXA3 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ighv8-6A0A0A6YXA3 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ighv8-6A0A0A6YXA3 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ighv8-6A0A0A6YXA3 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ighv8-6A0A0A6YXA3 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Ighv8-6A0A0A6YXA3 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv8-6A0A0A6YXA3 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv8-6A0A0A6YXA3 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv8-6A0A0A6YXA3 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Ighv8-6A0A0A6YXA3 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC16.31■□□□□ 0.2
Ighv8-6A0A0A6YXA3 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv8-6A0A0A6YXA3 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv8-6A0A0A6YXA3 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv8-6A0A0A6YXA3 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ighv8-6A0A0A6YXA3 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Ighv8-6A0A0A6YXA3 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ighv8-6A0A0A6YXA3 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ighv8-6A0A0A6YXA3 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ighv8-6A0A0A6YXA3 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC16.3■□□□□ 0.2
Ighv8-6A0A0A6YXA3 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv8-6A0A0A6YXA3 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 106.8 ms