Protein–RNA interactions for Protein: A0A075B642

Trav10, T cell receptor alpha variable 10 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10A0A075B642 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav10A0A075B642 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.41■□□□□ 0.7
Trav10A0A075B642 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trav10A0A075B642 Gm27502-201ENSMUST00000183495 199 ntBASIC19.41■□□□□ 0.7
Trav10A0A075B642 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav10A0A075B642 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav10A0A075B642 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Trav10A0A075B642 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Trav10A0A075B642 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trav10A0A075B642 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav10A0A075B642 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.4■□□□□ 0.7
Trav10A0A075B642 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trav10A0A075B642 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.39■□□□□ 0.69
Trav10A0A075B642 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav10A0A075B642 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trav10A0A075B642 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trav10A0A075B642 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Trav10A0A075B642 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trav10A0A075B642 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Trav10A0A075B642 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.38■□□□□ 0.69
Trav10A0A075B642 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trav10A0A075B642 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trav10A0A075B642 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trav10A0A075B642 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav10A0A075B642 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav10A0A075B642 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.37■□□□□ 0.69
Trav10A0A075B642 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trav10A0A075B642 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav10A0A075B642 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav10A0A075B642 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav10A0A075B642 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.37■□□□□ 0.69
Trav10A0A075B642 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav10A0A075B642 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
Trav10A0A075B642 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav10A0A075B642 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trav10A0A075B642 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trav10A0A075B642 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav10A0A075B642 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav10A0A075B642 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Trav10A0A075B642 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav10A0A075B642 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trav10A0A075B642 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav10A0A075B642 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.34■□□□□ 0.69
Trav10A0A075B642 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Trav10A0A075B642 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Trav10A0A075B642 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trav10A0A075B642 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trav10A0A075B642 Mir6538-201ENSMUST00000183713 110 ntBASIC19.33■□□□□ 0.68
Trav10A0A075B642 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.33■□□□□ 0.68
Trav10A0A075B642 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trav10A0A075B642 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.68
Trav10A0A075B642 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trav10A0A075B642 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trav10A0A075B642 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav10A0A075B642 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav10A0A075B642 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav10A0A075B642 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav10A0A075B642 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav10A0A075B642 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav10A0A075B642 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav10A0A075B642 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trav10A0A075B642 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trav10A0A075B642 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trav10A0A075B642 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trav10A0A075B642 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.31■□□□□ 0.68
Trav10A0A075B642 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Trav10A0A075B642 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Trav10A0A075B642 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Trav10A0A075B642 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
Trav10A0A075B642 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trav10A0A075B642 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.3■□□□□ 0.68
Trav10A0A075B642 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav10A0A075B642 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.3■□□□□ 0.68
Trav10A0A075B642 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trav10A0A075B642 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav10A0A075B642 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Trav10A0A075B642 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trav10A0A075B642 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav10A0A075B642 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav10A0A075B642 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.29■□□□□ 0.68
Trav10A0A075B642 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trav10A0A075B642 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav10A0A075B642 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav10A0A075B642 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav10A0A075B642 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav10A0A075B642 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trav10A0A075B642 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav10A0A075B642 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav10A0A075B642 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trav10A0A075B642 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav10A0A075B642 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Trav10A0A075B642 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Trav10A0A075B642 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.28■□□□□ 0.68
Trav10A0A075B642 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.28■□□□□ 0.68
Trav10A0A075B642 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav10A0A075B642 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Trav10A0A075B642 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Trav10A0A075B642 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Trav10A0A075B642 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Trav10A0A075B642 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms