Protein–RNA interactions for Protein: A0A075B626

Trav12n-2, T cell receptor alpha variable 12D-2, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12n-2A0A075B626 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.76■□□□□ 0.75
Trav12n-2A0A075B626 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav12n-2A0A075B626 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav12n-2A0A075B626 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav12n-2A0A075B626 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trav12n-2A0A075B626 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Trav12n-2A0A075B626 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trav12n-2A0A075B626 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Trav12n-2A0A075B626 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trav12n-2A0A075B626 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Trav12n-2A0A075B626 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
Trav12n-2A0A075B626 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trav12n-2A0A075B626 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Trav12n-2A0A075B626 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trav12n-2A0A075B626 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trav12n-2A0A075B626 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trav12n-2A0A075B626 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trav12n-2A0A075B626 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trav12n-2A0A075B626 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trav12n-2A0A075B626 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trav12n-2A0A075B626 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav12n-2A0A075B626 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav12n-2A0A075B626 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav12n-2A0A075B626 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav12n-2A0A075B626 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav12n-2A0A075B626 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trav12n-2A0A075B626 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.72■□□□□ 0.75
Trav12n-2A0A075B626 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Trav12n-2A0A075B626 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.72■□□□□ 0.75
Trav12n-2A0A075B626 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.72■□□□□ 0.75
Trav12n-2A0A075B626 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trav12n-2A0A075B626 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trav12n-2A0A075B626 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trav12n-2A0A075B626 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trav12n-2A0A075B626 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
Trav12n-2A0A075B626 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.71■□□□□ 0.75
Trav12n-2A0A075B626 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.71■□□□□ 0.75
Trav12n-2A0A075B626 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trav12n-2A0A075B626 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Trav12n-2A0A075B626 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Trav12n-2A0A075B626 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.71■□□□□ 0.75
Trav12n-2A0A075B626 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trav12n-2A0A075B626 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Trav12n-2A0A075B626 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav12n-2A0A075B626 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav12n-2A0A075B626 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav12n-2A0A075B626 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav12n-2A0A075B626 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trav12n-2A0A075B626 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trav12n-2A0A075B626 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Trav12n-2A0A075B626 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trav12n-2A0A075B626 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Trav12n-2A0A075B626 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.69■□□□□ 0.74
Trav12n-2A0A075B626 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
Trav12n-2A0A075B626 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trav12n-2A0A075B626 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trav12n-2A0A075B626 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trav12n-2A0A075B626 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trav12n-2A0A075B626 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trav12n-2A0A075B626 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trav12n-2A0A075B626 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trav12n-2A0A075B626 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trav12n-2A0A075B626 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trav12n-2A0A075B626 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trav12n-2A0A075B626 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trav12n-2A0A075B626 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trav12n-2A0A075B626 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trav12n-2A0A075B626 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.67■□□□□ 0.74
Trav12n-2A0A075B626 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trav12n-2A0A075B626 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trav12n-2A0A075B626 Gm22567-201ENSMUST00000175542 342 ntBASIC19.66■□□□□ 0.74
Trav12n-2A0A075B626 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.66■□□□□ 0.74
Trav12n-2A0A075B626 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Trav12n-2A0A075B626 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.66■□□□□ 0.74
Trav12n-2A0A075B626 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trav12n-2A0A075B626 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trav12n-2A0A075B626 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Trav12n-2A0A075B626 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Trav12n-2A0A075B626 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trav12n-2A0A075B626 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trav12n-2A0A075B626 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trav12n-2A0A075B626 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.63■□□□□ 0.73
Trav12n-2A0A075B626 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Trav12n-2A0A075B626 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trav12n-2A0A075B626 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.63■□□□□ 0.73
Trav12n-2A0A075B626 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trav12n-2A0A075B626 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.62■□□□□ 0.73
Trav12n-2A0A075B626 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav12n-2A0A075B626 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav12n-2A0A075B626 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav12n-2A0A075B626 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav12n-2A0A075B626 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trav12n-2A0A075B626 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.62■□□□□ 0.73
Trav12n-2A0A075B626 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trav12n-2A0A075B626 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trav12n-2A0A075B626 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trav12n-2A0A075B626 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Trav12n-2A0A075B626 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trav12n-2A0A075B626 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.6■□□□□ 0.73
Trav12n-2A0A075B626 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms