Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Trav16d-dv11A0A075B617 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Trav16d-dv11A0A075B617 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav16d-dv11A0A075B617 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav16d-dv11A0A075B617 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Trav16d-dv11A0A075B617 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav16d-dv11A0A075B617 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav16d-dv11A0A075B617 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav16d-dv11A0A075B617 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav16d-dv11A0A075B617 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Trav16d-dv11A0A075B617 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Trav16d-dv11A0A075B617 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav16d-dv11A0A075B617 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav16d-dv11A0A075B617 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Trav16d-dv11A0A075B617 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav16d-dv11A0A075B617 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav16d-dv11A0A075B617 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav16d-dv11A0A075B617 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav16d-dv11A0A075B617 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav16d-dv11A0A075B617 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav16d-dv11A0A075B617 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav16d-dv11A0A075B617 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav16d-dv11A0A075B617 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav16d-dv11A0A075B617 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Trav16d-dv11A0A075B617 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav16d-dv11A0A075B617 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav16d-dv11A0A075B617 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Trav16d-dv11A0A075B617 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC16.08■□□□□ 0.16
Trav16d-dv11A0A075B617 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav16d-dv11A0A075B617 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav16d-dv11A0A075B617 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav16d-dv11A0A075B617 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
Trav16d-dv11A0A075B617 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav16d-dv11A0A075B617 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav16d-dv11A0A075B617 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav16d-dv11A0A075B617 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC16.07■□□□□ 0.16
Trav16d-dv11A0A075B617 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav16d-dv11A0A075B617 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Trav16d-dv11A0A075B617 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav16d-dv11A0A075B617 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav16d-dv11A0A075B617 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav16d-dv11A0A075B617 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav16d-dv11A0A075B617 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav16d-dv11A0A075B617 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav16d-dv11A0A075B617 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trav16d-dv11A0A075B617 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav16d-dv11A0A075B617 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav16d-dv11A0A075B617 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav16d-dv11A0A075B617 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav16d-dv11A0A075B617 Gm32051-202ENSMUST00000197905 2385 ntBASIC16.05■□□□□ 0.16
Trav16d-dv11A0A075B617 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav16d-dv11A0A075B617 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav16d-dv11A0A075B617 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav16d-dv11A0A075B617 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav16d-dv11A0A075B617 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Trav16d-dv11A0A075B617 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav16d-dv11A0A075B617 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Trav16d-dv11A0A075B617 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav16d-dv11A0A075B617 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav16d-dv11A0A075B617 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav16d-dv11A0A075B617 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC16.03■□□□□ 0.16
Trav16d-dv11A0A075B617 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav16d-dv11A0A075B617 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC16.02■□□□□ 0.16
Trav16d-dv11A0A075B617 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC16.02■□□□□ 0.16
Trav16d-dv11A0A075B617 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC16.02■□□□□ 0.16
Trav16d-dv11A0A075B617 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC16.02■□□□□ 0.16
Trav16d-dv11A0A075B617 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav16d-dv11A0A075B617 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav16d-dv11A0A075B617 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC16.02■□□□□ 0.15
Trav16d-dv11A0A075B617 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Trav16d-dv11A0A075B617 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Trav16d-dv11A0A075B617 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC16.01■□□□□ 0.15
Trav16d-dv11A0A075B617 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC16.01■□□□□ 0.15
Trav16d-dv11A0A075B617 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav16d-dv11A0A075B617 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav16d-dv11A0A075B617 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav16d-dv11A0A075B617 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav16d-dv11A0A075B617 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav16d-dv11A0A075B617 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Trav16d-dv11A0A075B617 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav16d-dv11A0A075B617 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav16d-dv11A0A075B617 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav16d-dv11A0A075B617 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav16d-dv11A0A075B617 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav16d-dv11A0A075B617 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC15.99■□□□□ 0.15
Trav16d-dv11A0A075B617 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav16d-dv11A0A075B617 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav16d-dv11A0A075B617 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav16d-dv11A0A075B617 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Trav16d-dv11A0A075B617 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav16d-dv11A0A075B617 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav16d-dv11A0A075B617 Gm24970-201ENSMUST00000175582 82 ntBASIC15.98■□□□□ 0.15
Trav16d-dv11A0A075B617 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Trav16d-dv11A0A075B617 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav16d-dv11A0A075B617 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Trav16d-dv11A0A075B617 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav16d-dv11A0A075B617 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Trav16d-dv11A0A075B617 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav16d-dv11A0A075B617 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav16d-dv11A0A075B617 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 116.8 ms