Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
H2afb2S4R1M3 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC22.12■■□□□ 1.13
H2afb2S4R1M3 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
H2afb2S4R1M3 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
H2afb2S4R1M3 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
H2afb2S4R1M3 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
H2afb2S4R1M3 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
H2afb2S4R1M3 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
H2afb2S4R1M3 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC22.09■■□□□ 1.13
H2afb2S4R1M3 Gm44428-201ENSMUST00000204474 874 ntBASIC22.09■■□□□ 1.13
H2afb2S4R1M3 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
H2afb2S4R1M3 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
H2afb2S4R1M3 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
H2afb2S4R1M3 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
H2afb2S4R1M3 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
H2afb2S4R1M3 Gm11687-201ENSMUST00000118911 886 ntBASIC22.08■■□□□ 1.13
H2afb2S4R1M3 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC22.08■■□□□ 1.13
H2afb2S4R1M3 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
H2afb2S4R1M3 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
H2afb2S4R1M3 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
H2afb2S4R1M3 Gm28731-201ENSMUST00000185564 1569 ntBASIC22.08■■□□□ 1.12
H2afb2S4R1M3 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
H2afb2S4R1M3 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
H2afb2S4R1M3 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
H2afb2S4R1M3 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
H2afb2S4R1M3 Gm5987-201ENSMUST00000196433 1151 ntBASIC22.06■■□□□ 1.12
H2afb2S4R1M3 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
H2afb2S4R1M3 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
H2afb2S4R1M3 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
H2afb2S4R1M3 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
H2afb2S4R1M3 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
H2afb2S4R1M3 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
H2afb2S4R1M3 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
H2afb2S4R1M3 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
H2afb2S4R1M3 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
H2afb2S4R1M3 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
H2afb2S4R1M3 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
H2afb2S4R1M3 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC22.03■■□□□ 1.12
H2afb2S4R1M3 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
H2afb2S4R1M3 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
H2afb2S4R1M3 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
H2afb2S4R1M3 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
H2afb2S4R1M3 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC22.01■■□□□ 1.11
H2afb2S4R1M3 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC22.01■■□□□ 1.11
H2afb2S4R1M3 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
H2afb2S4R1M3 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
H2afb2S4R1M3 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
H2afb2S4R1M3 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
H2afb2S4R1M3 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
H2afb2S4R1M3 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
H2afb2S4R1M3 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC22■■□□□ 1.11
H2afb2S4R1M3 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC22■■□□□ 1.11
H2afb2S4R1M3 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
H2afb2S4R1M3 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
H2afb2S4R1M3 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.99■■□□□ 1.11
H2afb2S4R1M3 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.99■■□□□ 1.11
H2afb2S4R1M3 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
H2afb2S4R1M3 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
H2afb2S4R1M3 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
H2afb2S4R1M3 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
H2afb2S4R1M3 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
H2afb2S4R1M3 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
H2afb2S4R1M3 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
H2afb2S4R1M3 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
H2afb2S4R1M3 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
H2afb2S4R1M3 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
H2afb2S4R1M3 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.96■■□□□ 1.11
H2afb2S4R1M3 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
H2afb2S4R1M3 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.96■■□□□ 1.11
H2afb2S4R1M3 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
H2afb2S4R1M3 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.95■■□□□ 1.1
H2afb2S4R1M3 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
H2afb2S4R1M3 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
H2afb2S4R1M3 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
H2afb2S4R1M3 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
H2afb2S4R1M3 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
H2afb2S4R1M3 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
H2afb2S4R1M3 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
H2afb2S4R1M3 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
H2afb2S4R1M3 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
H2afb2S4R1M3 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
H2afb2S4R1M3 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
H2afb2S4R1M3 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.93■■□□□ 1.1
H2afb2S4R1M3 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
H2afb2S4R1M3 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
H2afb2S4R1M3 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
H2afb2S4R1M3 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
H2afb2S4R1M3 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
H2afb2S4R1M3 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
H2afb2S4R1M3 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
H2afb2S4R1M3 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
H2afb2S4R1M3 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.92■■□□□ 1.1
H2afb2S4R1M3 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
H2afb2S4R1M3 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
H2afb2S4R1M3 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
H2afb2S4R1M3 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
H2afb2S4R1M3 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
H2afb2S4R1M3 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
H2afb2S4R1M3 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.91■■□□□ 1.1
H2afb2S4R1M3 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.91■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 175 ms