Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
ClcnkaQ9WUB7 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.28■□□□□ 0.84
ClcnkaQ9WUB7 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
ClcnkaQ9WUB7 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
ClcnkaQ9WUB7 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.28■□□□□ 0.84
ClcnkaQ9WUB7 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ClcnkaQ9WUB7 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ClcnkaQ9WUB7 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ClcnkaQ9WUB7 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ClcnkaQ9WUB7 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
ClcnkaQ9WUB7 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ClcnkaQ9WUB7 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ClcnkaQ9WUB7 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ClcnkaQ9WUB7 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
ClcnkaQ9WUB7 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ClcnkaQ9WUB7 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
ClcnkaQ9WUB7 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
ClcnkaQ9WUB7 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ClcnkaQ9WUB7 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ClcnkaQ9WUB7 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ClcnkaQ9WUB7 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.26■□□□□ 0.83
ClcnkaQ9WUB7 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ClcnkaQ9WUB7 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ClcnkaQ9WUB7 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
ClcnkaQ9WUB7 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ClcnkaQ9WUB7 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ClcnkaQ9WUB7 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ClcnkaQ9WUB7 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.25■□□□□ 0.83
ClcnkaQ9WUB7 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.25■□□□□ 0.83
ClcnkaQ9WUB7 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ClcnkaQ9WUB7 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.24■□□□□ 0.83
ClcnkaQ9WUB7 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ClcnkaQ9WUB7 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
ClcnkaQ9WUB7 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
ClcnkaQ9WUB7 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ClcnkaQ9WUB7 Gm11175-201ENSMUST00000116172 543 ntBASIC20.24■□□□□ 0.83
ClcnkaQ9WUB7 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ClcnkaQ9WUB7 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ClcnkaQ9WUB7 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ClcnkaQ9WUB7 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.23■□□□□ 0.83
ClcnkaQ9WUB7 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ClcnkaQ9WUB7 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ClcnkaQ9WUB7 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ClcnkaQ9WUB7 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ClcnkaQ9WUB7 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ClcnkaQ9WUB7 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
ClcnkaQ9WUB7 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ClcnkaQ9WUB7 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ClcnkaQ9WUB7 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.22■□□□□ 0.83
ClcnkaQ9WUB7 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ClcnkaQ9WUB7 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
ClcnkaQ9WUB7 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ClcnkaQ9WUB7 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ClcnkaQ9WUB7 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ClcnkaQ9WUB7 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.21■□□□□ 0.83
ClcnkaQ9WUB7 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ClcnkaQ9WUB7 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
ClcnkaQ9WUB7 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ClcnkaQ9WUB7 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.21■□□□□ 0.83
ClcnkaQ9WUB7 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
ClcnkaQ9WUB7 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ClcnkaQ9WUB7 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ClcnkaQ9WUB7 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ClcnkaQ9WUB7 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.21■□□□□ 0.83
ClcnkaQ9WUB7 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
ClcnkaQ9WUB7 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ClcnkaQ9WUB7 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
ClcnkaQ9WUB7 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ClcnkaQ9WUB7 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ClcnkaQ9WUB7 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ClcnkaQ9WUB7 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.19■□□□□ 0.82
ClcnkaQ9WUB7 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ClcnkaQ9WUB7 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ClcnkaQ9WUB7 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ClcnkaQ9WUB7 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ClcnkaQ9WUB7 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ClcnkaQ9WUB7 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ClcnkaQ9WUB7 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.18■□□□□ 0.82
ClcnkaQ9WUB7 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ClcnkaQ9WUB7 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
ClcnkaQ9WUB7 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ClcnkaQ9WUB7 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ClcnkaQ9WUB7 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ClcnkaQ9WUB7 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.17■□□□□ 0.82
ClcnkaQ9WUB7 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.17■□□□□ 0.82
ClcnkaQ9WUB7 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ClcnkaQ9WUB7 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
ClcnkaQ9WUB7 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.16■□□□□ 0.82
ClcnkaQ9WUB7 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ClcnkaQ9WUB7 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
ClcnkaQ9WUB7 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ClcnkaQ9WUB7 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ClcnkaQ9WUB7 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
ClcnkaQ9WUB7 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
ClcnkaQ9WUB7 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ClcnkaQ9WUB7 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ClcnkaQ9WUB7 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
ClcnkaQ9WUB7 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ClcnkaQ9WUB7 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ClcnkaQ9WUB7 Gm44428-201ENSMUST00000204474 874 ntBASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms