Protein–RNA interactions for Protein: Q9R1R0

Lhx6, LIM/homeobox protein Lhx6, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx6Q9R1R0 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lhx6Q9R1R0 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lhx6Q9R1R0 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Lhx6Q9R1R0 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lhx6Q9R1R0 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Lhx6Q9R1R0 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lhx6Q9R1R0 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lhx6Q9R1R0 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Lhx6Q9R1R0 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lhx6Q9R1R0 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lhx6Q9R1R0 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lhx6Q9R1R0 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.53■□□□□ 0.88
Lhx6Q9R1R0 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Lhx6Q9R1R0 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lhx6Q9R1R0 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Lhx6Q9R1R0 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lhx6Q9R1R0 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
Lhx6Q9R1R0 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.52■□□□□ 0.87
Lhx6Q9R1R0 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.52■□□□□ 0.87
Lhx6Q9R1R0 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Lhx6Q9R1R0 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Lhx6Q9R1R0 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.51■□□□□ 0.87
Lhx6Q9R1R0 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Lhx6Q9R1R0 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Lhx6Q9R1R0 Gm9847-201ENSMUST00000052528 599 ntBASIC20.51■□□□□ 0.87
Lhx6Q9R1R0 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lhx6Q9R1R0 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Lhx6Q9R1R0 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lhx6Q9R1R0 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lhx6Q9R1R0 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lhx6Q9R1R0 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.49■□□□□ 0.87
Lhx6Q9R1R0 Gm10232-201ENSMUST00000089221 720 ntBASIC20.49■□□□□ 0.87
Lhx6Q9R1R0 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lhx6Q9R1R0 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lhx6Q9R1R0 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Lhx6Q9R1R0 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.49■□□□□ 0.87
Lhx6Q9R1R0 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.49■□□□□ 0.87
Lhx6Q9R1R0 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lhx6Q9R1R0 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lhx6Q9R1R0 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
Lhx6Q9R1R0 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Lhx6Q9R1R0 Gm44428-201ENSMUST00000204474 874 ntBASIC20.48■□□□□ 0.87
Lhx6Q9R1R0 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Lhx6Q9R1R0 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lhx6Q9R1R0 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lhx6Q9R1R0 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.47■□□□□ 0.87
Lhx6Q9R1R0 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.47■□□□□ 0.87
Lhx6Q9R1R0 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lhx6Q9R1R0 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lhx6Q9R1R0 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lhx6Q9R1R0 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Lhx6Q9R1R0 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Lhx6Q9R1R0 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.46■□□□□ 0.87
Lhx6Q9R1R0 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Lhx6Q9R1R0 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Lhx6Q9R1R0 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Lhx6Q9R1R0 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lhx6Q9R1R0 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Lhx6Q9R1R0 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Lhx6Q9R1R0 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lhx6Q9R1R0 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Lhx6Q9R1R0 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
Lhx6Q9R1R0 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Lhx6Q9R1R0 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.44■□□□□ 0.86
Lhx6Q9R1R0 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.44■□□□□ 0.86
Lhx6Q9R1R0 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.44■□□□□ 0.86
Lhx6Q9R1R0 Gm21956-201ENSMUST00000179946 522 ntBASIC20.44■□□□□ 0.86
Lhx6Q9R1R0 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lhx6Q9R1R0 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lhx6Q9R1R0 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lhx6Q9R1R0 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Lhx6Q9R1R0 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lhx6Q9R1R0 Gm29257-201ENSMUST00000186115 639 ntBASIC20.43■□□□□ 0.86
Lhx6Q9R1R0 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lhx6Q9R1R0 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Lhx6Q9R1R0 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Lhx6Q9R1R0 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Lhx6Q9R1R0 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lhx6Q9R1R0 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Lhx6Q9R1R0 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.41■□□□□ 0.86
Lhx6Q9R1R0 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Lhx6Q9R1R0 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Lhx6Q9R1R0 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.41■□□□□ 0.86
Lhx6Q9R1R0 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.4■□□□□ 0.86
Lhx6Q9R1R0 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Lhx6Q9R1R0 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.4■□□□□ 0.86
Lhx6Q9R1R0 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.4■□□□□ 0.86
Lhx6Q9R1R0 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Lhx6Q9R1R0 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Lhx6Q9R1R0 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Lhx6Q9R1R0 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Lhx6Q9R1R0 Gm8495-201ENSMUST00000188740 694 ntBASIC20.39■□□□□ 0.85
Lhx6Q9R1R0 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lhx6Q9R1R0 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lhx6Q9R1R0 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lhx6Q9R1R0 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Lhx6Q9R1R0 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lhx6Q9R1R0 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lhx6Q9R1R0 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Lhx6Q9R1R0 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms