Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rbfox1Q9JJ43 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rbfox1Q9JJ43 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rbfox1Q9JJ43 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rbfox1Q9JJ43 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC18.78■□□□□ 0.6
Rbfox1Q9JJ43 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Rbfox1Q9JJ43 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rbfox1Q9JJ43 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Rbfox1Q9JJ43 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.78■□□□□ 0.6
Rbfox1Q9JJ43 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Rbfox1Q9JJ43 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
Rbfox1Q9JJ43 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rbfox1Q9JJ43 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rbfox1Q9JJ43 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rbfox1Q9JJ43 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Rbfox1Q9JJ43 Mir3960-201ENSMUST00000198213 73 ntBASIC18.77■□□□□ 0.6
Rbfox1Q9JJ43 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.77■□□□□ 0.6
Rbfox1Q9JJ43 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Rbfox1Q9JJ43 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Rbfox1Q9JJ43 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rbfox1Q9JJ43 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rbfox1Q9JJ43 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rbfox1Q9JJ43 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rbfox1Q9JJ43 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rbfox1Q9JJ43 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rbfox1Q9JJ43 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Rbfox1Q9JJ43 Gm22567-201ENSMUST00000175542 342 ntBASIC18.76■□□□□ 0.59
Rbfox1Q9JJ43 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rbfox1Q9JJ43 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rbfox1Q9JJ43 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC18.75■□□□□ 0.59
Rbfox1Q9JJ43 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.75■□□□□ 0.59
Rbfox1Q9JJ43 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rbfox1Q9JJ43 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rbfox1Q9JJ43 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rbfox1Q9JJ43 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rbfox1Q9JJ43 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
Rbfox1Q9JJ43 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Rbfox1Q9JJ43 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rbfox1Q9JJ43 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rbfox1Q9JJ43 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rbfox1Q9JJ43 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.74■□□□□ 0.59
Rbfox1Q9JJ43 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rbfox1Q9JJ43 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rbfox1Q9JJ43 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
Rbfox1Q9JJ43 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rbfox1Q9JJ43 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rbfox1Q9JJ43 Gm7432-201ENSMUST00000210343 879 ntBASIC18.73■□□□□ 0.59
Rbfox1Q9JJ43 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rbfox1Q9JJ43 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.73■□□□□ 0.59
Rbfox1Q9JJ43 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rbfox1Q9JJ43 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rbfox1Q9JJ43 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rbfox1Q9JJ43 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rbfox1Q9JJ43 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.72■□□□□ 0.59
Rbfox1Q9JJ43 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rbfox1Q9JJ43 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rbfox1Q9JJ43 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rbfox1Q9JJ43 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.71■□□□□ 0.59
Rbfox1Q9JJ43 Terc-201ENSMUST00000082862 423 ntBASIC18.71■□□□□ 0.59
Rbfox1Q9JJ43 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rbfox1Q9JJ43 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rbfox1Q9JJ43 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.7■□□□□ 0.58
Rbfox1Q9JJ43 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Rbfox1Q9JJ43 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.7■□□□□ 0.58
Rbfox1Q9JJ43 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rbfox1Q9JJ43 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rbfox1Q9JJ43 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Rbfox1Q9JJ43 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rbfox1Q9JJ43 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rbfox1Q9JJ43 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rbfox1Q9JJ43 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rbfox1Q9JJ43 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rbfox1Q9JJ43 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rbfox1Q9JJ43 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rbfox1Q9JJ43 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.69■□□□□ 0.58
Rbfox1Q9JJ43 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rbfox1Q9JJ43 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rbfox1Q9JJ43 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rbfox1Q9JJ43 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Rbfox1Q9JJ43 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rbfox1Q9JJ43 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC18.68■□□□□ 0.58
Rbfox1Q9JJ43 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rbfox1Q9JJ43 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rbfox1Q9JJ43 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rbfox1Q9JJ43 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rbfox1Q9JJ43 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.67■□□□□ 0.58
Rbfox1Q9JJ43 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rbfox1Q9JJ43 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Rbfox1Q9JJ43 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rbfox1Q9JJ43 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rbfox1Q9JJ43 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rbfox1Q9JJ43 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rbfox1Q9JJ43 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rbfox1Q9JJ43 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Rbfox1Q9JJ43 Gm11599-201ENSMUST00000118720 878 ntBASIC18.66■□□□□ 0.58
Rbfox1Q9JJ43 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC18.66■□□□□ 0.58
Rbfox1Q9JJ43 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.66■□□□□ 0.58
Rbfox1Q9JJ43 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
Rbfox1Q9JJ43 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rbfox1Q9JJ43 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms