Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.81■□□□□ 0.92
Hmgn3Q9DCB1 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.81■□□□□ 0.92
Hmgn3Q9DCB1 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Hmgn3Q9DCB1 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hmgn3Q9DCB1 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.8■□□□□ 0.92
Hmgn3Q9DCB1 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hmgn3Q9DCB1 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hmgn3Q9DCB1 Gm9397-201ENSMUST00000200125 605 ntBASIC20.79■□□□□ 0.92
Hmgn3Q9DCB1 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.78■□□□□ 0.92
Hmgn3Q9DCB1 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hmgn3Q9DCB1 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.77■□□□□ 0.92
Hmgn3Q9DCB1 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.77■□□□□ 0.92
Hmgn3Q9DCB1 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.77■□□□□ 0.92
Hmgn3Q9DCB1 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hmgn3Q9DCB1 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC20.76■□□□□ 0.91
Hmgn3Q9DCB1 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hmgn3Q9DCB1 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hmgn3Q9DCB1 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hmgn3Q9DCB1 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hmgn3Q9DCB1 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.75■□□□□ 0.91
Hmgn3Q9DCB1 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Hmgn3Q9DCB1 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.75■□□□□ 0.91
Hmgn3Q9DCB1 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hmgn3Q9DCB1 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.75■□□□□ 0.91
Hmgn3Q9DCB1 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hmgn3Q9DCB1 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.75■□□□□ 0.91
Hmgn3Q9DCB1 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hmgn3Q9DCB1 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.75■□□□□ 0.91
Hmgn3Q9DCB1 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hmgn3Q9DCB1 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Hmgn3Q9DCB1 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.74■□□□□ 0.91
Hmgn3Q9DCB1 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hmgn3Q9DCB1 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hmgn3Q9DCB1 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Hmgn3Q9DCB1 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Hmgn3Q9DCB1 Gm24970-201ENSMUST00000175582 82 ntBASIC20.73■□□□□ 0.91
Hmgn3Q9DCB1 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
Hmgn3Q9DCB1 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Hmgn3Q9DCB1 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hmgn3Q9DCB1 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.72■□□□□ 0.91
Hmgn3Q9DCB1 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Hmgn3Q9DCB1 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hmgn3Q9DCB1 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hmgn3Q9DCB1 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Hmgn3Q9DCB1 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.71■□□□□ 0.91
Hmgn3Q9DCB1 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hmgn3Q9DCB1 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hmgn3Q9DCB1 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.71■□□□□ 0.91
Hmgn3Q9DCB1 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hmgn3Q9DCB1 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.7■□□□□ 0.9
Hmgn3Q9DCB1 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hmgn3Q9DCB1 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.7■□□□□ 0.9
Hmgn3Q9DCB1 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Hmgn3Q9DCB1 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hmgn3Q9DCB1 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Hmgn3Q9DCB1 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hmgn3Q9DCB1 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hmgn3Q9DCB1 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.69■□□□□ 0.9
Hmgn3Q9DCB1 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hmgn3Q9DCB1 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Hmgn3Q9DCB1 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Hmgn3Q9DCB1 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hmgn3Q9DCB1 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Hmgn3Q9DCB1 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.67■□□□□ 0.9
Hmgn3Q9DCB1 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hmgn3Q9DCB1 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hmgn3Q9DCB1 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hmgn3Q9DCB1 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hmgn3Q9DCB1 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hmgn3Q9DCB1 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hmgn3Q9DCB1 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.66■□□□□ 0.9
Hmgn3Q9DCB1 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hmgn3Q9DCB1 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Hmgn3Q9DCB1 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.66■□□□□ 0.9
Hmgn3Q9DCB1 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hmgn3Q9DCB1 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Hmgn3Q9DCB1 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hmgn3Q9DCB1 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20.65■□□□□ 0.9
Hmgn3Q9DCB1 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hmgn3Q9DCB1 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Hmgn3Q9DCB1 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Hmgn3Q9DCB1 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Hmgn3Q9DCB1 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hmgn3Q9DCB1 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.64■□□□□ 0.89
Hmgn3Q9DCB1 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hmgn3Q9DCB1 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hmgn3Q9DCB1 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Hmgn3Q9DCB1 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.89
Hmgn3Q9DCB1 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hmgn3Q9DCB1 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hmgn3Q9DCB1 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hmgn3Q9DCB1 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hmgn3Q9DCB1 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hmgn3Q9DCB1 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Hmgn3Q9DCB1 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hmgn3Q9DCB1 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hmgn3Q9DCB1 Gm45855-201ENSMUST00000212546 880 ntBASIC20.62■□□□□ 0.89
Hmgn3Q9DCB1 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hmgn3Q9DCB1 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hmgn3Q9DCB1 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms