Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Mbd3l1Q9D9H3 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Mbd3l1Q9D9H3 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.26■□□□□ 0.67
Mbd3l1Q9D9H3 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mbd3l1Q9D9H3 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mbd3l1Q9D9H3 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mbd3l1Q9D9H3 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mbd3l1Q9D9H3 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Mbd3l1Q9D9H3 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mbd3l1Q9D9H3 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Mbd3l1Q9D9H3 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mbd3l1Q9D9H3 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC19.24■□□□□ 0.67
Mbd3l1Q9D9H3 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.23■□□□□ 0.67
Mbd3l1Q9D9H3 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.23■□□□□ 0.67
Mbd3l1Q9D9H3 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Mbd3l1Q9D9H3 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mbd3l1Q9D9H3 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC19.23■□□□□ 0.67
Mbd3l1Q9D9H3 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mbd3l1Q9D9H3 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mbd3l1Q9D9H3 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mbd3l1Q9D9H3 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mbd3l1Q9D9H3 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Mbd3l1Q9D9H3 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.22■□□□□ 0.67
Mbd3l1Q9D9H3 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mbd3l1Q9D9H3 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mbd3l1Q9D9H3 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Mbd3l1Q9D9H3 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.21■□□□□ 0.67
Mbd3l1Q9D9H3 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Mbd3l1Q9D9H3 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mbd3l1Q9D9H3 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Mbd3l1Q9D9H3 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mbd3l1Q9D9H3 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mbd3l1Q9D9H3 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Mbd3l1Q9D9H3 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mbd3l1Q9D9H3 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Mbd3l1Q9D9H3 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mbd3l1Q9D9H3 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mbd3l1Q9D9H3 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Mbd3l1Q9D9H3 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Mbd3l1Q9D9H3 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mbd3l1Q9D9H3 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mbd3l1Q9D9H3 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mbd3l1Q9D9H3 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mbd3l1Q9D9H3 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Mbd3l1Q9D9H3 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mbd3l1Q9D9H3 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mbd3l1Q9D9H3 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Mbd3l1Q9D9H3 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mbd3l1Q9D9H3 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.17■□□□□ 0.66
Mbd3l1Q9D9H3 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Mbd3l1Q9D9H3 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Mbd3l1Q9D9H3 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Mbd3l1Q9D9H3 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Mbd3l1Q9D9H3 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mbd3l1Q9D9H3 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mbd3l1Q9D9H3 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mbd3l1Q9D9H3 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mbd3l1Q9D9H3 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mbd3l1Q9D9H3 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mbd3l1Q9D9H3 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mbd3l1Q9D9H3 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.15■□□□□ 0.66
Mbd3l1Q9D9H3 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Mbd3l1Q9D9H3 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Mbd3l1Q9D9H3 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Mbd3l1Q9D9H3 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mbd3l1Q9D9H3 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mbd3l1Q9D9H3 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Mbd3l1Q9D9H3 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mbd3l1Q9D9H3 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Mbd3l1Q9D9H3 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Mbd3l1Q9D9H3 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Mbd3l1Q9D9H3 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Mbd3l1Q9D9H3 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
Mbd3l1Q9D9H3 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Mbd3l1Q9D9H3 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Mbd3l1Q9D9H3 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Mbd3l1Q9D9H3 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Mbd3l1Q9D9H3 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Mbd3l1Q9D9H3 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Mbd3l1Q9D9H3 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Mbd3l1Q9D9H3 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Mbd3l1Q9D9H3 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Mbd3l1Q9D9H3 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Mbd3l1Q9D9H3 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Mbd3l1Q9D9H3 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Mbd3l1Q9D9H3 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Mbd3l1Q9D9H3 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
Mbd3l1Q9D9H3 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Mbd3l1Q9D9H3 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.08■□□□□ 0.64
Mbd3l1Q9D9H3 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Mbd3l1Q9D9H3 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Mbd3l1Q9D9H3 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Mbd3l1Q9D9H3 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Mbd3l1Q9D9H3 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Mbd3l1Q9D9H3 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Mbd3l1Q9D9H3 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Mbd3l1Q9D9H3 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Mbd3l1Q9D9H3 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
Mbd3l1Q9D9H3 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.07■□□□□ 0.64
Mbd3l1Q9D9H3 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms