Protein–RNA interactions for Protein: Q9D5J6

Shpk, Sedoheptulokinase, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShpkQ9D5J6 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
ShpkQ9D5J6 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ShpkQ9D5J6 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ShpkQ9D5J6 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ShpkQ9D5J6 Gm14121-201ENSMUST00000121441 1380 ntBASIC18.54■□□□□ 0.56
ShpkQ9D5J6 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
ShpkQ9D5J6 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ShpkQ9D5J6 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ShpkQ9D5J6 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
ShpkQ9D5J6 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC18.53■□□□□ 0.56
ShpkQ9D5J6 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ShpkQ9D5J6 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
ShpkQ9D5J6 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ShpkQ9D5J6 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ShpkQ9D5J6 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
ShpkQ9D5J6 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC18.51■□□□□ 0.55
ShpkQ9D5J6 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
ShpkQ9D5J6 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
ShpkQ9D5J6 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ShpkQ9D5J6 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
ShpkQ9D5J6 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ShpkQ9D5J6 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ShpkQ9D5J6 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
ShpkQ9D5J6 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
ShpkQ9D5J6 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ShpkQ9D5J6 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
ShpkQ9D5J6 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
ShpkQ9D5J6 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
ShpkQ9D5J6 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ShpkQ9D5J6 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ShpkQ9D5J6 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ShpkQ9D5J6 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
ShpkQ9D5J6 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ShpkQ9D5J6 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ShpkQ9D5J6 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ShpkQ9D5J6 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ShpkQ9D5J6 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
ShpkQ9D5J6 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ShpkQ9D5J6 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
ShpkQ9D5J6 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.48■□□□□ 0.55
ShpkQ9D5J6 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ShpkQ9D5J6 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
ShpkQ9D5J6 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ShpkQ9D5J6 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ShpkQ9D5J6 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ShpkQ9D5J6 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ShpkQ9D5J6 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
ShpkQ9D5J6 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ShpkQ9D5J6 Gm30023-201ENSMUST00000197970 889 ntBASIC18.46■□□□□ 0.55
ShpkQ9D5J6 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.46■□□□□ 0.55
ShpkQ9D5J6 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
ShpkQ9D5J6 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ShpkQ9D5J6 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.46■□□□□ 0.55
ShpkQ9D5J6 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.46■□□□□ 0.54
ShpkQ9D5J6 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.45■□□□□ 0.54
ShpkQ9D5J6 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ShpkQ9D5J6 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ShpkQ9D5J6 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
ShpkQ9D5J6 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
ShpkQ9D5J6 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ShpkQ9D5J6 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
ShpkQ9D5J6 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
ShpkQ9D5J6 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ShpkQ9D5J6 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ShpkQ9D5J6 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ShpkQ9D5J6 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
ShpkQ9D5J6 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ShpkQ9D5J6 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ShpkQ9D5J6 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
ShpkQ9D5J6 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
ShpkQ9D5J6 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ShpkQ9D5J6 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ShpkQ9D5J6 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ShpkQ9D5J6 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
ShpkQ9D5J6 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.43■□□□□ 0.54
ShpkQ9D5J6 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.43■□□□□ 0.54
ShpkQ9D5J6 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ShpkQ9D5J6 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ShpkQ9D5J6 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.42■□□□□ 0.54
ShpkQ9D5J6 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC18.42■□□□□ 0.54
ShpkQ9D5J6 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ShpkQ9D5J6 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
ShpkQ9D5J6 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.42■□□□□ 0.54
ShpkQ9D5J6 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ShpkQ9D5J6 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.42■□□□□ 0.54
ShpkQ9D5J6 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
ShpkQ9D5J6 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ShpkQ9D5J6 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ShpkQ9D5J6 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ShpkQ9D5J6 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ShpkQ9D5J6 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ShpkQ9D5J6 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ShpkQ9D5J6 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.41■□□□□ 0.54
ShpkQ9D5J6 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ShpkQ9D5J6 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ShpkQ9D5J6 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ShpkQ9D5J6 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.4■□□□□ 0.54
ShpkQ9D5J6 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
ShpkQ9D5J6 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
ShpkQ9D5J6 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms