Protein–RNA interactions for Protein: Q9D1H0

Rita1, RBPJ-interacting and tubulin-associated protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rita1Q9D1H0 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rita1Q9D1H0 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rita1Q9D1H0 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rita1Q9D1H0 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Rita1Q9D1H0 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rita1Q9D1H0 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rita1Q9D1H0 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rita1Q9D1H0 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rita1Q9D1H0 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rita1Q9D1H0 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rita1Q9D1H0 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
Rita1Q9D1H0 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rita1Q9D1H0 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rita1Q9D1H0 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rita1Q9D1H0 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rita1Q9D1H0 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rita1Q9D1H0 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.51■□□□□ 0.87
Rita1Q9D1H0 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rita1Q9D1H0 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.51■□□□□ 0.87
Rita1Q9D1H0 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rita1Q9D1H0 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rita1Q9D1H0 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rita1Q9D1H0 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rita1Q9D1H0 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.5■□□□□ 0.87
Rita1Q9D1H0 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rita1Q9D1H0 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Rita1Q9D1H0 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Rita1Q9D1H0 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rita1Q9D1H0 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rita1Q9D1H0 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.49■□□□□ 0.87
Rita1Q9D1H0 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rita1Q9D1H0 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rita1Q9D1H0 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rita1Q9D1H0 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rita1Q9D1H0 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rita1Q9D1H0 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rita1Q9D1H0 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rita1Q9D1H0 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rita1Q9D1H0 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rita1Q9D1H0 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.47■□□□□ 0.87
Rita1Q9D1H0 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Rita1Q9D1H0 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Rita1Q9D1H0 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rita1Q9D1H0 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rita1Q9D1H0 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.46■□□□□ 0.87
Rita1Q9D1H0 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.46■□□□□ 0.87
Rita1Q9D1H0 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rita1Q9D1H0 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rita1Q9D1H0 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rita1Q9D1H0 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rita1Q9D1H0 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
Rita1Q9D1H0 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rita1Q9D1H0 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Rita1Q9D1H0 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Rita1Q9D1H0 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rita1Q9D1H0 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rita1Q9D1H0 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rita1Q9D1H0 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rita1Q9D1H0 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.45■□□□□ 0.86
Rita1Q9D1H0 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rita1Q9D1H0 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rita1Q9D1H0 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rita1Q9D1H0 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rita1Q9D1H0 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Rita1Q9D1H0 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.44■□□□□ 0.86
Rita1Q9D1H0 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rita1Q9D1H0 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.44■□□□□ 0.86
Rita1Q9D1H0 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rita1Q9D1H0 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.43■□□□□ 0.86
Rita1Q9D1H0 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rita1Q9D1H0 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rita1Q9D1H0 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rita1Q9D1H0 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rita1Q9D1H0 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.42■□□□□ 0.86
Rita1Q9D1H0 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rita1Q9D1H0 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.41■□□□□ 0.86
Rita1Q9D1H0 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Rita1Q9D1H0 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rita1Q9D1H0 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rita1Q9D1H0 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.41■□□□□ 0.86
Rita1Q9D1H0 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rita1Q9D1H0 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.4■□□□□ 0.86
Rita1Q9D1H0 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.4■□□□□ 0.86
Rita1Q9D1H0 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.4■□□□□ 0.86
Rita1Q9D1H0 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rita1Q9D1H0 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rita1Q9D1H0 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rita1Q9D1H0 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rita1Q9D1H0 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rita1Q9D1H0 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rita1Q9D1H0 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rita1Q9D1H0 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Rita1Q9D1H0 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rita1Q9D1H0 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.38■□□□□ 0.85
Rita1Q9D1H0 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rita1Q9D1H0 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Rita1Q9D1H0 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rita1Q9D1H0 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rita1Q9D1H0 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rita1Q9D1H0 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms